Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm14293-201ENSMUST00000118528 577 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Gm26102-201ENSMUST00000157251 284 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Gm26335-201ENSMUST00000178449 107 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Gm43284-201ENSMUST00000200103 253 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Gm45456-201ENSMUST00000210841 243 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Gm19441-201ENSMUST00000221545 330 ntBASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Shank3Q4ACU6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Gm25052-201ENSMUST00000122661 158 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Gm23196-201ENSMUST00000158806 107 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Gm8940-201ENSMUST00000212585 219 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Shank3Q4ACU6 Mdga2-203ENSMUST00000113942 423 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm23332-201ENSMUST00000157424 275 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm27957-201ENSMUST00000184054 127 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm10193-201ENSMUST00000188288 231 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Trbv6-201ENSMUST00000193743 276 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.43□□□□□ -2.18
Shank3Q4ACU6 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm9318-201ENSMUST00000222444 438 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm23042-201ENSMUST00000083866 101 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Mir669f-201ENSMUST00000103850 121 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm11522-201ENSMUST00000120533 176 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm25454-201ENSMUST00000157947 315 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm26358-201ENSMUST00000158215 97 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm29603-201ENSMUST00000186792 334 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm18775-201ENSMUST00000190763 586 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm45375-201ENSMUST00000210338 280 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Gm45791-201ENSMUST00000212908 352 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Shank3Q4ACU6 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm23321-201ENSMUST00000104465 126 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm14670-201ENSMUST00000117327 337 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm15215-201ENSMUST00000117773 489 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 U6.1-201ENSMUST00000157443 101 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm22328-201ENSMUST00000158074 112 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm23725-201ENSMUST00000177876 107 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Mir7667-201ENSMUST00000183866 63 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm27761-201ENSMUST00000184091 131 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm27236-201ENSMUST00000184147 442 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm28506-201ENSMUST00000189937 150 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm23040-201ENSMUST00000083869 163 ntBASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Shank3Q4ACU6 Gm25541-201ENSMUST00000116888 126 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm8858-201ENSMUST00000118259 342 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm23331-201ENSMUST00000157423 108 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm24438-201ENSMUST00000157893 115 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm25996-201ENSMUST00000175393 117 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm24304-201ENSMUST00000177635 107 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Mir6370-201ENSMUST00000183510 120 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Mir3068-202ENSMUST00000197755 79 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm3724-201ENSMUST00000197957 349 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm44666-201ENSMUST00000208544 391 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm18696-201ENSMUST00000220103 274 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm26263-201ENSMUST00000083281 164 ntBASIC1.41□□□□□ -2.18
Shank3Q4ACU6 Gm12235-201ENSMUST00000118596 170 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Gm23589-201ENSMUST00000157660 105 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Snord11-201ENSMUST00000158468 84 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.4□□□□□ -2.18
Shank3Q4ACU6 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Gm23462-201ENSMUST00000083264 104 ntBASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Shank3Q4ACU6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Shank3Q4ACU6 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Shank3Q4ACU6 Gm6954-201ENSMUST00000117416 225 ntBASIC1.4□□□□□ -2.19
Shank3Q4ACU6 Gm14364-201ENSMUST00000129209 267 ntBASIC1.4□□□□□ -2.19
Shank3Q4ACU6 Gm26393-201ENSMUST00000157625 129 ntBASIC1.4□□□□□ -2.19
Shank3Q4ACU6 Gm24222-201ENSMUST00000158834 93 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms