Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm28755-201ENSMUST00000185773 199 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm37624-201ENSMUST00000193751 219 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm37417-201ENSMUST00000195257 454 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Mir376a-201ENSMUST00000197584 68 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm43978-201ENSMUST00000203491 451 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm6030-201ENSMUST00000078768 402 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm26341-201ENSMUST00000104561 134 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm15272-201ENSMUST00000120865 233 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm15223-201ENSMUST00000120989 826 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm11414-201ENSMUST00000121795 263 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm22027-201ENSMUST00000122737 127 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm23470-201ENSMUST00000157129 120 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm24106-201ENSMUST00000175498 127 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm24167-201ENSMUST00000177733 124 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm21827-201ENSMUST00000178247 423 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm24028-201ENSMUST00000178991 124 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm37997-201ENSMUST00000193515 267 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm44903-201ENSMUST00000206840 130 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Gm26204-201ENSMUST00000082906 107 ntBASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col28a1Q2UY11 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm25538-201ENSMUST00000101943 107 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm26018-201ENSMUST00000104406 128 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm11065-201ENSMUST00000111462 228 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm24586-201ENSMUST00000116695 89 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm7123-201ENSMUST00000117647 213 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm25270-201ENSMUST00000122606 138 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm22416-201ENSMUST00000158590 88 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm23196-201ENSMUST00000158806 107 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm25119-201ENSMUST00000158815 88 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm29022-201ENSMUST00000190702 225 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm43427-201ENSMUST00000198188 331 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Snord7-201ENSMUST00000083781 97 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Gm26314-201ENSMUST00000083891 107 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.67□□□□□ -1.98
Col28a1Q2UY11 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col28a1Q2UY11 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm25015-201ENSMUST00000158400 128 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm20144-201ENSMUST00000203031 165 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm7065-201ENSMUST00000222150 474 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm22247-201ENSMUST00000082476 131 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Snord82-201ENSMUST00000082889 70 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm23264-201ENSMUST00000083372 107 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col28a1Q2UY11 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col28a1Q2UY11 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col28a1Q2UY11 Gm22750-201ENSMUST00000102076 103 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Mir344c-201ENSMUST00000103919 92 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm15896-201ENSMUST00000118045 440 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm26026-201ENSMUST00000122726 123 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm23982-201ENSMUST00000157141 106 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm23599-201ENSMUST00000157261 251 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm23641-201ENSMUST00000157857 101 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm23277-201ENSMUST00000157914 136 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm24676-201ENSMUST00000158758 75 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm22853-201ENSMUST00000174974 131 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm24799-201ENSMUST00000178431 79 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm25081-201ENSMUST00000082534 108 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm24948-201ENSMUST00000082866 207 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm22294-201ENSMUST00000083308 104 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm25896-201ENSMUST00000083713 136 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col28a1Q2UY11 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm25466-201ENSMUST00000103995 132 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Snord19-201ENSMUST00000104609 76 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm11819-201ENSMUST00000122192 372 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm25914-201ENSMUST00000157618 153 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm25223-201ENSMUST00000158200 110 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm25920-201ENSMUST00000158307 99 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms