Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm15365-201ENSMUST00000122392 300 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm24911-201ENSMUST00000157292 136 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm23901-201ENSMUST00000157570 107 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm27700-201ENSMUST00000185003 81 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm28314-201ENSMUST00000191276 345 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm44024-201ENSMUST00000203008 476 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm20144-201ENSMUST00000203031 165 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm26265-201ENSMUST00000083277 135 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Gm24163-201ENSMUST00000093660 132 ntBASIC3.25□□□□□ -1.89
Ssrp1Q08943 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssrp1Q08943 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssrp1Q08943 Mir541-201ENSMUST00000102097 90 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm23836-201ENSMUST00000104434 129 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm12417-201ENSMUST00000119153 403 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm25012-201ENSMUST00000158396 164 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm27421-201ENSMUST00000184729 167 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm37104-201ENSMUST00000193278 196 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm26265-202ENSMUST00000196326 133 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm24966-201ENSMUST00000082443 79 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Gm24164-201ENSMUST00000093663 104 ntBASIC3.24□□□□□ -1.89
Ssrp1Q08943 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssrp1Q08943 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ssrp1Q08943 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ssrp1Q08943 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm24127-201ENSMUST00000104110 130 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Mir1193-201ENSMUST00000116761 121 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm6574-201ENSMUST00000120037 362 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm22883-201ENSMUST00000157376 106 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm23325-201ENSMUST00000157422 129 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm22800-201ENSMUST00000175627 94 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm27761-201ENSMUST00000184091 131 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Mir7047-201ENSMUST00000184595 64 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm29452-201ENSMUST00000187996 313 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Trbv18-201ENSMUST00000194256 294 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm44533-201ENSMUST00000207782 268 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm45543-201ENSMUST00000209327 88 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Gm26495-201ENSMUST00000083152 137 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.23□□□□□ -1.89
Ssrp1Q08943 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.23□□□□□ -1.89
Ssrp1Q08943 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.23□□□□□ -1.89
Ssrp1Q08943 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Ssrp1Q08943 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.23□□□□□ -1.89
Ssrp1Q08943 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Mir499-201ENSMUST00000102357 79 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm15986-201ENSMUST00000122153 400 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm24006-201ENSMUST00000158462 132 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm25939-201ENSMUST00000179876 191 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm19901-201ENSMUST00000192191 495 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm37037-201ENSMUST00000194475 424 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm45907-201ENSMUST00000213023 193 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm10092-201ENSMUST00000077110 180 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm25589-201ENSMUST00000082502 166 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Gm24355-201ENSMUST00000082858 122 ntBASIC3.22□□□□□ -1.89
Ssrp1Q08943 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ssrp1Q08943 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ssrp1Q08943 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm12926-201ENSMUST00000121158 409 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm22145-201ENSMUST00000157396 148 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm2962-201ENSMUST00000159266 336 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm7958-201ENSMUST00000178255 468 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm23002-201ENSMUST00000179221 107 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm7950-201ENSMUST00000179633 468 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm24204-201ENSMUST00000082950 107 ntBASIC3.21□□□□□ -1.9
Ssrp1Q08943 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ssrp1Q08943 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ssrp1Q08943 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm6954-201ENSMUST00000117416 225 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm12954-201ENSMUST00000118610 611 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm26277-201ENSMUST00000157097 152 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm25059-201ENSMUST00000157367 117 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm25615-201ENSMUST00000177836 94 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm43217-201ENSMUST00000199513 367 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.2□□□□□ -1.9
Ssrp1Q08943 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm22299-201ENSMUST00000082663 136 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm23039-201ENSMUST00000083870 161 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ssrp1Q08943 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.2□□□□□ -1.9
Ssrp1Q08943 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ssrp1Q08943 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm22939-201ENSMUST00000103958 131 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm25421-201ENSMUST00000104218 164 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms