Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm29167-201ENSMUST00000190024 377 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Col6a1Q04857 Mir1195-201ENSMUST00000116818 98 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm23492-201ENSMUST00000116837 115 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm14215-201ENSMUST00000120578 221 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm23536-201ENSMUST00000157541 134 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm26215-201ENSMUST00000158584 139 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm22476-201ENSMUST00000158902 100 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm22910-201ENSMUST00000178568 132 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm28358-202ENSMUST00000189292 223 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm44964-201ENSMUST00000207011 273 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.74□□□□□ -1.81
Col6a1Q04857 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a1Q04857 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a1Q04857 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm24276-201ENSMUST00000102181 110 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm15190-201ENSMUST00000120855 276 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm12926-201ENSMUST00000121158 409 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm22225-201ENSMUST00000157358 278 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm44429-201ENSMUST00000203542 186 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm44182-201ENSMUST00000204052 115 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.73□□□□□ -1.81
Col6a1Q04857 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm24616-201ENSMUST00000083274 139 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Gm25895-201ENSMUST00000083714 100 ntBASIC3.73□□□□□ -1.81
Col6a1Q04857 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a1Q04857 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a1Q04857 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a1Q04857 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm24119-201ENSMUST00000103979 246 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm26293-201ENSMUST00000104170 84 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm25728-201ENSMUST00000104525 159 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm27532-201ENSMUST00000183726 113 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm29603-201ENSMUST00000186792 334 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm37575-201ENSMUST00000195467 309 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm26456-201ENSMUST00000082831 111 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm24163-201ENSMUST00000093660 132 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.72□□□□□ -1.81
Col6a1Q04857 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a1Q04857 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.71□□□□□ -1.81
Col6a1Q04857 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
Col6a1Q04857 Gm14389-201ENSMUST00000140453 241 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm20672-201ENSMUST00000176605 261 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm23370-202ENSMUST00000197008 129 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm44256-201ENSMUST00000203304 335 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm30534-201ENSMUST00000217928 207 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm24453-201ENSMUST00000083346 76 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a1Q04857 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.71□□□□□ -1.82
Col6a1Q04857 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a1Q04857 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a1Q04857 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a1Q04857 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm26145-201ENSMUST00000104476 127 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm14402-201ENSMUST00000122217 508 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm12443-201ENSMUST00000122308 323 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm23886-201ENSMUST00000122684 313 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm16546-201ENSMUST00000159442 355 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm27271-201ENSMUST00000183509 170 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm27783-201ENSMUST00000183534 105 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm43199-201ENSMUST00000200019 307 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.7□□□□□ -1.82
Col6a1Q04857 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm25634-201ENSMUST00000082667 105 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Gm23095-201ENSMUST00000083446 107 ntBASIC3.7□□□□□ -1.82
Col6a1Q04857 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a1Q04857 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a1Q04857 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm22674-201ENSMUST00000104413 131 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm9119-201ENSMUST00000118866 495 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm23197-201ENSMUST00000158809 112 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm28344-201ENSMUST00000185704 279 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm37796-201ENSMUST00000195327 134 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Snora19-201ENSMUST00000082962 132 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm23658-201ENSMUST00000083233 132 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a1Q04857 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.69□□□□□ -1.82
Col6a1Q04857 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Gm24716-201ENSMUST00000157524 104 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms