Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm22075-201ENSMUST00000158599 192 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm22192-201ENSMUST00000175128 85 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm17522-201ENSMUST00000178144 498 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm37796-201ENSMUST00000195327 134 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm19620-201ENSMUST00000195972 434 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Mir3068-202ENSMUST00000197755 79 ntBASIC3.6□□□□□ -1.83
Sox1P53783 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Snord21-201ENSMUST00000082519 94 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm26456-201ENSMUST00000082831 111 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm22421-201ENSMUST00000083058 107 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm25632-201ENSMUST00000083112 85 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox1P53783 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sox1P53783 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox1P53783 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sox1P53783 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sox1P53783 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.59□□□□□ -1.83
Sox1P53783 Gm22713-201ENSMUST00000116895 130 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm7123-201ENSMUST00000117647 213 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm12351-201ENSMUST00000118727 292 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm22034-201ENSMUST00000157283 134 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Mir6399-201ENSMUST00000184050 84 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm29553-201ENSMUST00000189692 279 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm44338-201ENSMUST00000198614 110 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.59□□□□□ -1.83
Sox1P53783 Gm25142-201ENSMUST00000082698 107 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Gm23095-201ENSMUST00000083446 107 ntBASIC3.59□□□□□ -1.83
Sox1P53783 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sox1P53783 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sox1P53783 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Sox1P53783 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Sox1P53783 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Sox1P53783 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sox1P53783 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox1P53783 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox1P53783 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Mir1298-201ENSMUST00000116681 98 ntBASIC3.58□□□□□ -1.84
Sox1P53783 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.58□□□□□ -1.84
Sox1P53783 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox1P53783 Gm26187-201ENSMUST00000157693 101 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm22551-201ENSMUST00000157795 103 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm22557-201ENSMUST00000157804 102 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm24054-201ENSMUST00000158619 105 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm27793-201ENSMUST00000183405 76 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm29308-201ENSMUST00000188863 315 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm28537-201ENSMUST00000189026 315 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm28924-201ENSMUST00000190012 241 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm29631-201ENSMUST00000191065 315 ntBASIC3.58□□□□□ -1.84
Sox1P53783 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Gm39147-201ENSMUST00000211376 465 ntBASIC3.58□□□□□ -1.84
Sox1P53783 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.58□□□□□ -1.84
Sox1P53783 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox1P53783 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox1P53783 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.58□□□□□ -1.84
Sox1P53783 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox1P53783 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox1P53783 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sox1P53783 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox1P53783 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sox1P53783 Gm5762-201ENSMUST00000119204 258 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Gm13801-201ENSMUST00000120750 160 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Gm23476-201ENSMUST00000158881 274 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Gm42834-201ENSMUST00000196845 256 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox1P53783 Gm25856-201ENSMUST00000082786 75 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Snord35b-201ENSMUST00000082833 87 ntBASIC3.57□□□□□ -1.84
Sox1P53783 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sox1P53783 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox1P53783 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sox1P53783 Gm23063-201ENSMUST00000102350 93 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
Sox1P53783 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
Sox1P53783 Gm24119-201ENSMUST00000103979 246 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm24122-201ENSMUST00000104107 132 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm23320-201ENSMUST00000104462 127 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm11786-201ENSMUST00000120799 155 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm25270-201ENSMUST00000122606 138 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm22966-201ENSMUST00000157957 129 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm22666-201ENSMUST00000158717 164 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.56□□□□□ -1.84
Sox1P53783 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sox1P53783 Gm25457-201ENSMUST00000179509 107 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm24350-202ENSMUST00000198309 132 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm44964-201ENSMUST00000207011 273 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm45445-201ENSMUST00000209586 232 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Gm5010-201ENSMUST00000213131 260 ntBASIC3.56□□□□□ -1.84
Sox1P53783 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.56□□□□□ -1.84
Sox1P53783 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sox1P53783 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sox1P53783 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms