Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm26477-201ENSMUST00000122617 323 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Gm22722-201ENSMUST00000157467 132 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Gm22833-201ENSMUST00000158292 132 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Gm27921-201ENSMUST00000183968 108 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Gm24966-201ENSMUST00000082443 79 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Usp4P35123 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp4P35123 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usp4P35123 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp4P35123 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Usp4P35123 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Usp4P35123 Gm25376-201ENSMUST00000104340 133 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm14073-201ENSMUST00000117344 381 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm12304-201ENSMUST00000120312 385 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm25051-201ENSMUST00000158602 249 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm27271-201ENSMUST00000183509 170 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Mir6399-201ENSMUST00000184050 84 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm27465-201ENSMUST00000184290 91 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Trbv6-201ENSMUST00000193743 276 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm42739-201ENSMUST00000200687 226 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm36189-201ENSMUST00000204113 523 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm43932-201ENSMUST00000204499 52 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm44563-201ENSMUST00000207958 178 ntBASIC3.25□□□□□ -1.89
Usp4P35123 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.25□□□□□ -1.89
Usp4P35123 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm24163-201ENSMUST00000093660 132 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm24164-201ENSMUST00000093663 104 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Gm10360-201ENSMUST00000097219 272 ntBASIC3.25□□□□□ -1.89
Usp4P35123 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp4P35123 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.25□□□□□ -1.89
Usp4P35123 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Usp4P35123 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Usp4P35123 Gm24132-201ENSMUST00000104745 91 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm13761-201ENSMUST00000117238 807 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm14215-201ENSMUST00000120578 221 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm13443-201ENSMUST00000120770 555 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.24□□□□□ -1.89
Usp4P35123 Gm25863-201ENSMUST00000158249 329 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm24056-201ENSMUST00000158617 146 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Usp4P35123 Gm43746-201ENSMUST00000200028 317 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm24355-201ENSMUST00000082858 122 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Gm23462-201ENSMUST00000083264 104 ntBASIC3.24□□□□□ -1.89
Usp4P35123 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Usp4P35123 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm9009-201ENSMUST00000117321 326 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.23□□□□□ -1.89
Usp4P35123 Gm24908-201ENSMUST00000157294 127 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm27396-201ENSMUST00000157708 58 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm26088-201ENSMUST00000157896 131 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm24106-201ENSMUST00000175498 127 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm21827-201ENSMUST00000178247 423 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm17067-202ENSMUST00000180131 123 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Mir7k-201ENSMUST00000184115 110 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm37085-201ENSMUST00000193780 196 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.23□□□□□ -1.89
Usp4P35123 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.23□□□□□ -1.89
Usp4P35123 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm22978-201ENSMUST00000082607 160 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Gm24762-201ENSMUST00000083689 104 ntBASIC3.23□□□□□ -1.89
Usp4P35123 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Usp4P35123 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Usp4P35123 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.23□□□□□ -1.89
Usp4P35123 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Usp4P35123 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Usp4P35123 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp4P35123 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Usp4P35123 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Gm23202-201ENSMUST00000104376 129 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm6829-201ENSMUST00000119858 360 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm11204-201ENSMUST00000122438 147 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.22□□□□□ -1.89
Usp4P35123 Gm23536-201ENSMUST00000157541 134 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Mir1967-201ENSMUST00000157789 82 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm24601-201ENSMUST00000157970 143 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Gm26061-201ENSMUST00000175584 108 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Mir7667-201ENSMUST00000183866 63 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm29167-201ENSMUST00000190024 377 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm43193-201ENSMUST00000197732 441 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.22□□□□□ -1.89
Usp4P35123 Gm44429-201ENSMUST00000203542 186 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Gm45543-201ENSMUST00000209327 88 ntBASIC3.22□□□□□ -1.89
Usp4P35123 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.22□□□□□ -1.89
Usp4P35123 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.22□□□□□ -1.89
Usp4P35123 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Usp4P35123 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Usp4P35123 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usp4P35123 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Usp4P35123 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Usp4P35123 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usp4P35123 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms