Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm11356-201ENSMUST00000118974 192 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm14852-201ENSMUST00000120065 647 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm15223-201ENSMUST00000120989 826 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm25486-201ENSMUST00000158726 63 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col2a1P28481 Gm24086-201ENSMUST00000175171 98 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm27248-201ENSMUST00000184004 166 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm43529-201ENSMUST00000199178 412 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col2a1P28481 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.76□□□□□ -2.13
Col2a1P28481 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col2a1P28481 Gm23042-201ENSMUST00000083866 101 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Gm25257-201ENSMUST00000083907 110 ntBASIC1.76□□□□□ -2.13
Col2a1P28481 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Col2a1P28481 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col2a1P28481 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Col2a1P28481 Gm24275-201ENSMUST00000116780 146 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.75□□□□□ -2.13
Col2a1P28481 Gm16289-201ENSMUST00000162079 183 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Mir5136-201ENSMUST00000175573 76 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm26501-201ENSMUST00000178307 107 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm23660-201ENSMUST00000178362 79 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm24088-201ENSMUST00000179100 79 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm28008-201ENSMUST00000184021 186 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.75□□□□□ -2.13
Col2a1P28481 Gm37404-201ENSMUST00000195726 359 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm43472-201ENSMUST00000200175 154 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm42960-201ENSMUST00000202160 241 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm44909-201ENSMUST00000208756 165 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm24623-201ENSMUST00000082616 194 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm25207-201ENSMUST00000093745 107 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
Col2a1P28481 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col2a1P28481 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm25781-201ENSMUST00000122527 84 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.75□□□□□ -2.13
Col2a1P28481 Gm22560-201ENSMUST00000157332 120 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm26149-201ENSMUST00000157432 108 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm25339-201ENSMUST00000157458 232 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm22839-201ENSMUST00000158436 304 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm3027-201ENSMUST00000167579 451 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm7953-201ENSMUST00000168278 469 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm24154-201ENSMUST00000175261 130 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm21171-201ENSMUST00000180048 673 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Mir7052-201ENSMUST00000184821 65 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Mir7059-201ENSMUST00000184825 59 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm28579-201ENSMUST00000186143 369 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm20257-202ENSMUST00000188643 130 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm37281-201ENSMUST00000192412 439 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm43035-201ENSMUST00000197626 517 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Gm44520-201ENSMUST00000205447 802 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col2a1P28481 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.75□□□□□ -2.13
Col2a1P28481 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col2a1P28481 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.75□□□□□ -2.13
Col2a1P28481 Gm11065-201ENSMUST00000111462 228 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Mir669i-201ENSMUST00000117007 127 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm13085-201ENSMUST00000118356 171 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm24997-201ENSMUST00000157910 105 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm23476-201ENSMUST00000158881 274 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm7925-201ENSMUST00000166690 401 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col2a1P28481 Gm27640-201ENSMUST00000184580 147 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Mir195b-201ENSMUST00000184814 97 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm27624-201ENSMUST00000185047 177 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm28717-201ENSMUST00000189950 315 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm18551-201ENSMUST00000195594 642 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm34073-201ENSMUST00000195736 212 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm42506-201ENSMUST00000202009 150 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col2a1P28481 Gm25801-201ENSMUST00000082638 106 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Gm25856-201ENSMUST00000082786 75 ntBASIC1.74□□□□□ -2.13
Col2a1P28481 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.74□□□□□ -2.13
Col2a1P28481 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Col2a1P28481 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm12351-201ENSMUST00000118727 292 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm13409-201ENSMUST00000122072 546 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm16362-201ENSMUST00000135189 214 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.73□□□□□ -2.13
Col2a1P28481 Gm24504-201ENSMUST00000157679 100 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm24409-201ENSMUST00000157881 152 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm22085-201ENSMUST00000158344 110 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm24084-201ENSMUST00000175173 137 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm20698-201ENSMUST00000175657 233 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm25671-201ENSMUST00000178612 105 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm23307-201ENSMUST00000179167 105 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm21978-201ENSMUST00000179696 377 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm25286-201ENSMUST00000179790 105 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.73□□□□□ -2.13
Col2a1P28481 Gm42647-201ENSMUST00000195939 459 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm44825-201ENSMUST00000207557 150 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms