Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Sdc1P18828 Gm24068-201ENSMUST00000104513 132 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm14355-201ENSMUST00000117352 264 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm25279-201ENSMUST00000122608 133 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm14364-201ENSMUST00000129209 267 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm24726-201ENSMUST00000158232 121 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm24390-201ENSMUST00000179578 62 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm28648-201ENSMUST00000190092 343 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm19901-201ENSMUST00000192191 495 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.29□□□□□ -2.2
Sdc1P18828 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Sdc1P18828 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Sdc1P18828 Snord118-201ENSMUST00000082965 135 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Snora3-201ENSMUST00000083082 132 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm24536-201ENSMUST00000083144 107 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Gm26066-201ENSMUST00000083385 109 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.29□□□□□ -2.2
Sdc1P18828 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Sdc1P18828 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Sdc1P18828 Mir653-201ENSMUST00000102402 85 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Sdc1P18828 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm25376-201ENSMUST00000104340 133 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm25529-201ENSMUST00000104850 92 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm12255-201ENSMUST00000117184 284 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm12941-201ENSMUST00000117934 220 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm12351-201ENSMUST00000118727 292 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm24409-201ENSMUST00000157881 152 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.28□□□□□ -2.2
Sdc1P18828 Gm17113-201ENSMUST00000170118 171 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm27919-201ENSMUST00000185163 107 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm28383-201ENSMUST00000187563 139 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm9156-201ENSMUST00000189660 463 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm29262-201ENSMUST00000190084 196 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm5034-201ENSMUST00000199115 634 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm44654-201ENSMUST00000208052 329 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm18113-201ENSMUST00000220630 303 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 Gm24615-201ENSMUST00000083268 113 ntBASIC1.28□□□□□ -2.2
Sdc1P18828 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Sdc1P18828 Gm12417-201ENSMUST00000119153 403 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm14937-201ENSMUST00000119709 208 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm11471-201ENSMUST00000121824 198 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm11358-201ENSMUST00000122310 373 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm25543-201ENSMUST00000122678 312 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm23170-201ENSMUST00000157158 106 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm25914-201ENSMUST00000157618 153 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm24438-201ENSMUST00000157893 115 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm24348-201ENSMUST00000158710 130 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm25121-201ENSMUST00000179846 79 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Sdc1P18828 Gm43035-201ENSMUST00000197626 517 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Sdc1P18828 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Sdc1P18828 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm19441-201ENSMUST00000221545 330 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Gm25130-201ENSMUST00000082650 156 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Mir221-201ENSMUST00000083488 95 ntBASIC1.27□□□□□ -2.21
Sdc1P18828 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.27□□□□□ -2.21
Sdc1P18828 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Sdc1P18828 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm25414-201ENSMUST00000101814 107 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Sdc1P18828 Gm26077-201ENSMUST00000104064 123 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Mir344e-201ENSMUST00000104677 66 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm23551-201ENSMUST00000116852 121 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm13341-201ENSMUST00000120780 672 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm23656-201ENSMUST00000122626 112 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm22027-201ENSMUST00000122737 127 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Rnu7-201ENSMUST00000158458 62 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm24577-201ENSMUST00000158580 63 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm24229-201ENSMUST00000158830 118 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.26□□□□□ -2.21
Sdc1P18828 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm18588-201ENSMUST00000177308 492 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.26□□□□□ -2.21
Sdc1P18828 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Sdc1P18828 Gm5001-201ENSMUST00000204361 331 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm18453-201ENSMUST00000208000 626 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Gm18696-201ENSMUST00000220103 274 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.26□□□□□ -2.21
Sdc1P18828 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Sdc1P18828 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms