Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Cdx1P18111 Gm22591-201ENSMUST00000104243 106 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm14937-201ENSMUST00000119709 208 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm14362-201ENSMUST00000121679 273 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.21□□□□□ -2.22
Cdx1P18111 Gm15254-201ENSMUST00000149567 273 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm22328-201ENSMUST00000158074 112 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm23221-201ENSMUST00000158118 93 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm26405-201ENSMUST00000158495 100 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.21□□□□□ -2.22
Cdx1P18111 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.21□□□□□ -2.22
Cdx1P18111 Gm21815-201ENSMUST00000178213 664 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm27660-201ENSMUST00000184028 208 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm29037-201ENSMUST00000189092 313 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm29167-201ENSMUST00000190024 377 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm21064-202ENSMUST00000190583 278 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.21□□□□□ -2.22
Cdx1P18111 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.21□□□□□ -2.22
Cdx1P18111 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 BC022960-201ENSMUST00000119987 1815 ntBASIC1.21□□□□□ -2.22
Cdx1P18111 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
Cdx1P18111 Gm23015-201ENSMUST00000104145 128 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm23390-201ENSMUST00000157393 106 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm22654-201ENSMUST00000157874 105 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm24962-201ENSMUST00000157917 109 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm24418-201ENSMUST00000177597 79 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm24639-201ENSMUST00000178518 79 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm23076-201ENSMUST00000179082 79 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm25077-201ENSMUST00000179157 79 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm28740-201ENSMUST00000186142 215 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm28926-201ENSMUST00000191063 680 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm37641-201ENSMUST00000193837 239 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm44429-201ENSMUST00000203542 186 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm44446-201ENSMUST00000204864 255 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm46993-201ENSMUST00000220708 259 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Cdx1P18111 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm25475-201ENSMUST00000082825 180 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Gm26493-201ENSMUST00000083155 136 ntBASIC1.2□□□□□ -2.22
Cdx1P18111 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cdx1P18111 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cdx1P18111 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.19□□□□□ -2.22
Cdx1P18111 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Cdx1P18111 Gm24902-201ENSMUST00000158126 123 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm23339-201ENSMUST00000158962 139 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cdx1P18111 Gm3111-201ENSMUST00000167426 490 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
Cdx1P18111 Gm29013-201ENSMUST00000187431 237 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm19123-201ENSMUST00000190716 651 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdx1P18111 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdx1P18111 Gm44337-201ENSMUST00000196553 114 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm43911-201ENSMUST00000203097 76 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm45658-201ENSMUST00000209197 580 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm24536-201ENSMUST00000083144 107 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.19□□□□□ -2.22
Cdx1P18111 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdx1P18111 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cdx1P18111 Mir582-201ENSMUST00000103758 81 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm26082-201ENSMUST00000104070 127 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm24172-201ENSMUST00000104127 117 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm22193-201ENSMUST00000116868 76 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm15214-201ENSMUST00000122155 470 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm26038-201ENSMUST00000158151 106 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm23352-201ENSMUST00000158428 64 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm25831-201ENSMUST00000158924 163 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm22129-201ENSMUST00000179034 107 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Mir195b-201ENSMUST00000184814 97 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm28383-201ENSMUST00000187563 139 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm29262-201ENSMUST00000190084 196 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm18433-201ENSMUST00000192747 197 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Gm34073-201ENSMUST00000195736 212 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cdx1P18111 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdx1P18111 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdx1P18111 Gm22572-201ENSMUST00000082985 105 ntBASIC1.18□□□□□ -2.22
Cdx1P18111 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms