Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm24277-201ENSMUST00000158661 104 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Mir7039-201ENSMUST00000183852 85 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Mir6996-201ENSMUST00000183922 61 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Gm45080-201ENSMUST00000206648 283 ntBASIC3.87□□□□□ -1.79
Msx1P13297 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.87□□□□□ -1.79
Msx1P13297 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Msx1P13297 Gm26168-201ENSMUST00000083787 112 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Gm25681-201ENSMUST00000083938 106 ntBASIC3.87□□□□□ -1.79
Msx1P13297 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.87□□□□□ -1.79
Msx1P13297 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Msx1P13297 Gm25727-201ENSMUST00000104522 131 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm14299-201ENSMUST00000117586 397 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm14502-201ENSMUST00000118154 113 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm14602-201ENSMUST00000118625 340 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm25323-201ENSMUST00000122555 103 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm22135-201ENSMUST00000158752 108 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.86□□□□□ -1.79
Msx1P13297 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.86□□□□□ -1.79
Msx1P13297 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.86□□□□□ -1.79
Msx1P13297 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.86□□□□□ -1.79
Msx1P13297 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Msx1P13297 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Msx1P13297 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Msx1P13297 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Msx1P13297 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Msx1P13297 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx1P13297 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Msx1P13297 Gm24127-201ENSMUST00000104110 130 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Gm11285-201ENSMUST00000118443 322 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Gm12513-201ENSMUST00000118617 352 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Gm25367-201ENSMUST00000158846 106 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Gm29408-201ENSMUST00000187536 216 ntBASIC3.85□□□□□ -1.79
Msx1P13297 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.85□□□□□ -1.79
Msx1P13297 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.85□□□□□ -1.79
Msx1P13297 mt-Tv-201ENSMUST00000082389 69 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
Msx1P13297 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx1P13297 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.85□□□□□ -1.79
Msx1P13297 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Msx1P13297 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Msx1P13297 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx1P13297 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx1P13297 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Msx1P13297 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx1P13297 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx1P13297 Gm16265-201ENSMUST00000134558 108 ntBASIC3.84□□□□□ -1.79
Msx1P13297 Gm24314-201ENSMUST00000158274 123 ntBASIC3.84□□□□□ -1.79
Msx1P13297 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.84□□□□□ -1.79
Msx1P13297 Gm27792-201ENSMUST00000184031 115 ntBASIC3.84□□□□□ -1.79
Msx1P13297 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Msx1P13297 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.84□□□□□ -1.79
Msx1P13297 Gm34779-201ENSMUST00000210036 263 ntBASIC3.84□□□□□ -1.79
Msx1P13297 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.84□□□□□ -1.79
Msx1P13297 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.84□□□□□ -1.79
Msx1P13297 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.84□□□□□ -1.79
Msx1P13297 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Msx1P13297 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Msx1P13297 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Msx1P13297 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.84□□□□□ -1.8
Msx1P13297 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Msx1P13297 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Msx1P13297 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Msx1P13297 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Msx1P13297 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Msx1P13297 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Msx1P13297 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Gm25764-201ENSMUST00000104092 134 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm26418-201ENSMUST00000104275 137 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm26421-201ENSMUST00000104279 132 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm14567-201ENSMUST00000117155 174 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm11471-201ENSMUST00000121824 198 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm26276-201ENSMUST00000157099 109 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm23365-201ENSMUST00000175019 125 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm25960-201ENSMUST00000175110 125 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm44453-201ENSMUST00000175161 126 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm22800-201ENSMUST00000175627 94 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm25195-201ENSMUST00000177656 126 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.83□□□□□ -1.8
Msx1P13297 Mir1291-201ENSMUST00000199842 117 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.83□□□□□ -1.8
Msx1P13297 Snora7a-201ENSMUST00000082629 140 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm23509-201ENSMUST00000083080 160 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Snora34-201ENSMUST00000083402 138 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm22827-201ENSMUST00000083766 107 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Gm22868-201ENSMUST00000083955 164 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.83□□□□□ -1.8
Msx1P13297 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Msx1P13297 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Msx1P13297 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Msx1P13297 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Msx1P13297 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Msx1P13297 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms