Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AA413626-201ENSMUST00000121125 494 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm29613-201ENSMUST00000185846 313 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm29005-201ENSMUST00000186773 320 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm28409-201ENSMUST00000187064 103 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm29544-201ENSMUST00000188860 313 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Gm28808-201ENSMUST00000190978 313 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.46□□□□□ -2.34
Col1a1P11087 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.46□□□□□ -2.34
Col1a1P11087 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.46□□□□□ -2.34
Col1a1P11087 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Col1a1P11087 Gm13992-201ENSMUST00000120558 156 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm14761-201ENSMUST00000121363 262 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm15365-201ENSMUST00000122392 300 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm23587-201ENSMUST00000157658 84 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm24808-201ENSMUST00000157993 118 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm25334-201ENSMUST00000158036 110 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm23854-201ENSMUST00000158378 108 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm17052-201ENSMUST00000165496 289 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm22633-201ENSMUST00000179834 107 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Mir6411-201ENSMUST00000183556 108 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm44254-201ENSMUST00000204184 322 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.45□□□□□ -2.34
Col1a1P11087 Gm24588-201ENSMUST00000116696 83 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm14937-201ENSMUST00000119709 208 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm24598-201ENSMUST00000122510 74 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm22027-201ENSMUST00000122737 127 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm26102-201ENSMUST00000157251 284 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm24747-201ENSMUST00000157835 87 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm28688-201ENSMUST00000187301 268 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm45878-201ENSMUST00000211839 241 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm18160-201ENSMUST00000214279 827 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.44□□□□□ -2.34
Col1a1P11087 Gm23102-201ENSMUST00000083724 116 ntBASIC0.44□□□□□ -2.34
Col1a1P11087 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.44□□□□□ -2.34
Col1a1P11087 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm25378-201ENSMUST00000104333 129 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Col1a1P11087 Gm25544-201ENSMUST00000122676 120 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm23206-201ENSMUST00000122720 184 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm20438-201ENSMUST00000174441 329 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm27676-201ENSMUST00000183669 61 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm36966-201ENSMUST00000192217 413 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm43026-201ENSMUST00000202972 325 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm5955-201ENSMUST00000222712 219 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Col1a1P11087 Gm25403-201ENSMUST00000082971 143 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Snord1a-201ENSMUST00000083160 74 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm24018-201ENSMUST00000083232 107 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Mir421-201ENSMUST00000083575 76 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.43□□□□□ -2.34
Col1a1P11087 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Col1a1P11087 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Col1a1P11087 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm25325-201ENSMUST00000122559 86 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm16359-201ENSMUST00000124511 289 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm23277-201ENSMUST00000157914 136 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm23858-201ENSMUST00000158384 106 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.42□□□□□ -2.34
Col1a1P11087 Mir3089-201ENSMUST00000175350 84 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm20613-201ENSMUST00000175828 345 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm21815-201ENSMUST00000178213 664 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm24137-201ENSMUST00000180055 79 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm22391-201ENSMUST00000180356 79 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.42□□□□□ -2.34
Col1a1P11087 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.42□□□□□ -2.34
Col1a1P11087 Mir216a-201ENSMUST00000083605 72 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.42□□□□□ -2.34
Col1a1P11087 Mir710-201ENSMUST00000102088 110 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm24282-201ENSMUST00000104232 66 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm26147-201ENSMUST00000104479 114 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm23036-201ENSMUST00000157885 99 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm29600-201ENSMUST00000188687 377 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms