Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm24870-201ENSMUST00000179897 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22645-201ENSMUST00000180010 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24565-201ENSMUST00000180099 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23805-201ENSMUST00000180129 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25327-201ENSMUST00000180263 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22418-201ENSMUST00000180326 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm29229-201ENSMUST00000188874 323 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.35□□□□□ -2.19
Col5a1O88207 Gm43505-201ENSMUST00000200579 139 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23629-201ENSMUST00000082465 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23924-201ENSMUST00000082474 108 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22749-201ENSMUST00000082490 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22747-201ENSMUST00000082495 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22063-201ENSMUST00000082560 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23057-201ENSMUST00000082801 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26328-201ENSMUST00000082821 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26324-201ENSMUST00000083073 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24535-201ENSMUST00000083140 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26127-201ENSMUST00000083193 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24456-201ENSMUST00000083198 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24018-201ENSMUST00000083232 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25794-201ENSMUST00000083286 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23970-201ENSMUST00000083319 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25577-201ENSMUST00000083414 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24861-201ENSMUST00000083459 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23103-201ENSMUST00000083725 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23732-201ENSMUST00000083751 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25512-201ENSMUST00000083863 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22352-201ENSMUST00000083917 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24448-201ENSMUST00000083979 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24445-201ENSMUST00000083981 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22886-201ENSMUST00000093714 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col5a1O88207 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm13085-201ENSMUST00000118356 171 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm12779-201ENSMUST00000121496 143 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.34□□□□□ -2.19
Col5a1O88207 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm26049-201ENSMUST00000157313 108 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm23328-201ENSMUST00000157418 132 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm26402-201ENSMUST00000158499 113 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm24577-201ENSMUST00000158580 63 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm26430-201ENSMUST00000178054 107 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col5a1O88207 Gm23793-201ENSMUST00000179396 117 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Mir6346-201ENSMUST00000183982 81 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm27905-201ENSMUST00000184005 207 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm28647-201ENSMUST00000188416 197 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm44520-201ENSMUST00000205447 802 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm45673-201ENSMUST00000210293 358 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm18854-201ENSMUST00000211196 329 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm22247-201ENSMUST00000082476 131 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Gm25929-201ENSMUST00000082784 107 ntBASIC1.34□□□□□ -2.19
Col5a1O88207 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col5a1O88207 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col5a1O88207 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
Col5a1O88207 Gm11859-201ENSMUST00000118099 455 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm9059-201ENSMUST00000118319 183 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25321-201ENSMUST00000122558 102 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25335-201ENSMUST00000158043 103 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23221-201ENSMUST00000158118 93 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm22611-201ENSMUST00000158288 150 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23704-201ENSMUST00000158844 340 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm24737-201ENSMUST00000158861 100 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm7953-201ENSMUST00000168278 469 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23053-201ENSMUST00000175136 96 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23190-201ENSMUST00000180307 64 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm29350-201ENSMUST00000189141 541 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm42647-201ENSMUST00000195939 459 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.33□□□□□ -2.2
Col5a1O88207 Gm44825-201ENSMUST00000207557 150 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm44598-201ENSMUST00000207566 150 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.33□□□□□ -2.2
Col5a1O88207 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.33□□□□□ -2.2
Col5a1O88207 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25856-201ENSMUST00000082786 75 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25199-201ENSMUST00000083095 104 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Col5a1O88207 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Col5a1O88207 Gm13355-201ENSMUST00000117996 317 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm12351-201ENSMUST00000118727 292 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm14013-201ENSMUST00000119006 270 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm6829-201ENSMUST00000119858 360 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms