Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm28939-201ENSMUST00000190351 315 ntBASIC0.07□□□□□ -2.4
Abca4O35600 Gm28223-201ENSMUST00000190469 315 ntBASIC0.07□□□□□ -2.4
Abca4O35600 Gm29092-201ENSMUST00000190768 315 ntBASIC0.07□□□□□ -2.4
Abca4O35600 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Abca4O35600 Gm22785-201ENSMUST00000104087 132 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm25876-201ENSMUST00000104329 119 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm22091-201ENSMUST00000116908 127 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm12370-201ENSMUST00000117809 604 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm2962-201ENSMUST00000159266 336 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm24197-201ENSMUST00000175085 109 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.06□□□□□ -2.4
Abca4O35600 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.06□□□□□ -2.4
Abca4O35600 Gm27522-201ENSMUST00000183949 230 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm45815-201ENSMUST00000220241 146 ntBASIC0.06□□□□□ -2.4
Abca4O35600 Gm22368-201ENSMUST00000102416 109 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm22983-201ENSMUST00000158308 104 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.05□□□□□ -2.4
Abca4O35600 Mir28b-201ENSMUST00000175399 80 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.05□□□□□ -2.4
Abca4O35600 Gm43035-201ENSMUST00000197626 517 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm44338-201ENSMUST00000198614 110 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm23846-201ENSMUST00000083835 107 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Abca4O35600 Mir208b-201ENSMUST00000104735 77 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm14013-201ENSMUST00000119006 270 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm22611-201ENSMUST00000158288 150 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm25243-201ENSMUST00000174912 207 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm28921-201ENSMUST00000190219 378 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm18747-201ENSMUST00000198129 648 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.05□□□□□ -2.4
Abca4O35600 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.05□□□□□ -2.4
Abca4O35600 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
Abca4O35600 Gm14972-201ENSMUST00000121780 364 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm24997-201ENSMUST00000157910 105 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm20477-201ENSMUST00000174028 280 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm27475-201ENSMUST00000183420 61 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Mir8106-201ENSMUST00000184520 139 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Mir7065-201ENSMUST00000185110 61 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm37002-201ENSMUST00000194560 373 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm37743-201ENSMUST00000194645 376 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Mir6964-201ENSMUST00000200252 59 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm43897-201ENSMUST00000204019 309 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.04□□□□□ -2.4
Abca4O35600 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.04□□□□□ -2.4
Abca4O35600 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.04□□□□□ -2.4
Abca4O35600 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.04□□□□□ -2.4
Abca4O35600 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm22678-201ENSMUST00000116974 101 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm13482-201ENSMUST00000119842 254 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm25011-201ENSMUST00000158398 126 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Mir15a-201ENSMUST00000175266 84 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm26238-201ENSMUST00000175538 117 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Abca4O35600 Gm42925-201ENSMUST00000197359 285 ntBASIC0.04□□□□□ -2.4
Abca4O35600 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.04□□□□□ -2.4
Abca4O35600 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.04□□□□□ -2.4
Abca4O35600 Gm25637-201ENSMUST00000157529 107 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Mir3108-201ENSMUST00000175500 79 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm28560-201ENSMUST00000186091 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm28334-201ENSMUST00000186653 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm28495-201ENSMUST00000188452 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm28232-201ENSMUST00000188683 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm28481-201ENSMUST00000189231 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm29059-201ENSMUST00000191534 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm37765-201ENSMUST00000192395 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm37237-201ENSMUST00000192893 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm37193-201ENSMUST00000193087 513 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm36968-201ENSMUST00000193737 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm36956-201ENSMUST00000193830 214 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm38290-201ENSMUST00000195238 315 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm23370-202ENSMUST00000197008 129 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm45878-201ENSMUST00000211839 241 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm9472-201ENSMUST00000221625 526 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm25802-201ENSMUST00000082639 77 ntBASIC0.03□□□□□ -2.4
Abca4O35600 Gm8858-201ENSMUST00000118259 342 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.03□□□□□ -2.41
Abca4O35600 Gm11358-201ENSMUST00000122310 373 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Gm24598-201ENSMUST00000122510 74 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Gm22027-201ENSMUST00000122737 127 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Gm22765-201ENSMUST00000158371 128 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Gm27289-201ENSMUST00000183341 82 ntBASIC0.03□□□□□ -2.41
Abca4O35600 Mir6365-201ENSMUST00000183990 101 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms