Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mir6376-201ENSMUST00000185149 131 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm43722-201ENSMUST00000196054 124 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm6109-201ENSMUST00000223297 348 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm24356-201ENSMUST00000082859 106 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm26126-201ENSMUST00000083188 164 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm26500-201ENSMUST00000101867 106 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm24049-201ENSMUST00000102409 100 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm14803-201ENSMUST00000117163 361 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm14652-201ENSMUST00000118479 235 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm14678-201ENSMUST00000121396 482 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm23232-201ENSMUST00000157300 105 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm22945-201ENSMUST00000158557 157 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Mir28b-201ENSMUST00000175399 80 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm28008-201ENSMUST00000184021 186 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm36891-201ENSMUST00000191995 655 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm43676-201ENSMUST00000197532 540 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm44666-201ENSMUST00000208544 391 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm23625-201ENSMUST00000082457 100 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Mir29c-201ENSMUST00000083614 88 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav13d-3J3QMG8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm12926-201ENSMUST00000121158 409 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm14761-201ENSMUST00000121363 262 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm15986-201ENSMUST00000122153 400 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm24075-201ENSMUST00000158175 72 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm26214-201ENSMUST00000158581 107 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm24816-201ENSMUST00000175311 151 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm24573-201ENSMUST00000175499 112 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm27991-201ENSMUST00000184804 137 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm28900-201ENSMUST00000185232 156 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm19777-201ENSMUST00000191940 358 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm36946-201ENSMUST00000192706 435 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm43250-201ENSMUST00000196536 273 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm43583-201ENSMUST00000199235 303 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm44419-201ENSMUST00000203338 229 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm25793-201ENSMUST00000083287 107 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.04□□□□□ -2.08
Trav13d-3J3QMG8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm24937-201ENSMUST00000122597 134 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm23759-201ENSMUST00000158351 268 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm22242-201ENSMUST00000175224 118 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Mir6353-201ENSMUST00000183596 113 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm37713-201ENSMUST00000191746 198 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm44564-201ENSMUST00000207985 180 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm45791-201ENSMUST00000212908 352 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 Gm26175-201ENSMUST00000083794 131 ntBASIC2.03□□□□□ -2.08
Trav13d-3J3QMG8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.03□□□□□ -2.09
Trav13d-3J3QMG8 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm22782-201ENSMUST00000104082 132 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm12351-201ENSMUST00000118727 292 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm12647-201ENSMUST00000118977 265 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm23889-201ENSMUST00000122689 104 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm24896-201ENSMUST00000122741 135 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm23642-201ENSMUST00000157858 258 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29512-201ENSMUST00000185544 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28110-201ENSMUST00000185782 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28579-201ENSMUST00000186143 369 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29057-201ENSMUST00000186468 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29661-201ENSMUST00000186781 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28737-201ENSMUST00000186808 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29118-201ENSMUST00000186908 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28433-201ENSMUST00000187085 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28759-201ENSMUST00000187621 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28831-201ENSMUST00000187739 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28200-201ENSMUST00000187778 315 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms