Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Pcdh1F7BJK1 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Pcdh1F7BJK1 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Pcdh1F7BJK1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Mir693-201ENSMUST00000102187 89 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm12449-201ENSMUST00000117572 234 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm15799-201ENSMUST00000120899 289 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm23886-201ENSMUST00000122684 313 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm23602-201ENSMUST00000157258 132 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm22476-201ENSMUST00000158902 100 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm17117-201ENSMUST00000163665 299 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm24388-201ENSMUST00000177872 107 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm23922-201ENSMUST00000178792 79 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm24657-201ENSMUST00000180085 79 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm22996-201ENSMUST00000180236 79 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm27793-201ENSMUST00000183405 76 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm27392-201ENSMUST00000185041 101 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm45116-201ENSMUST00000207392 275 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm4036-201ENSMUST00000220842 626 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Pcdh1F7BJK1 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm12025-201ENSMUST00000117768 144 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm24908-201ENSMUST00000157294 127 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm23084-201ENSMUST00000157850 114 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm24998-201ENSMUST00000157908 89 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Mir1966-201ENSMUST00000158807 108 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm43991-201ENSMUST00000203751 274 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 AC115291.2-201ENSMUST00000228335 437 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm37777-201ENSMUST00000195546 3366 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3□□□□□ -1.93
Pcdh1F7BJK1 Gm25728-201ENSMUST00000104525 159 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm12335-201ENSMUST00000119738 327 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm24505-201ENSMUST00000157682 126 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm22075-201ENSMUST00000158599 192 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Mir21b-201ENSMUST00000184317 108 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm28314-201ENSMUST00000191276 345 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm25814-201ENSMUST00000082754 107 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm23723-201ENSMUST00000082996 132 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm23136-201ENSMUST00000083425 99 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Gm25630-201ENSMUST00000084000 162 ntBASIC2.99□□□□□ -1.93
Pcdh1F7BJK1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm25833-201ENSMUST00000104137 133 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm26293-201ENSMUST00000104170 84 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm24403-201ENSMUST00000104616 130 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm6071-201ENSMUST00000119561 440 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm43199-201ENSMUST00000200019 307 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm19563-201ENSMUST00000222031 270 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm22421-201ENSMUST00000083058 107 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.98□□□□□ -1.93
Pcdh1F7BJK1 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm14811-201ENSMUST00000117070 117 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm9119-201ENSMUST00000118866 495 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm14564-201ENSMUST00000122159 294 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm25625-201ENSMUST00000157221 96 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm23535-201ENSMUST00000157542 106 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm25860-201ENSMUST00000158252 126 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm16162-201ENSMUST00000162296 297 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm27921-201ENSMUST00000183968 108 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm28992-201ENSMUST00000190534 139 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Gm44355-201ENSMUST00000200417 104 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms