Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm12255-201ENSMUST00000117184 284 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm24839-201ENSMUST00000122602 107 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm23713-201ENSMUST00000157353 70 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm22615-201ENSMUST00000158102 70 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Cfap61-214ENSMUST00000167179 183 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm44459-201ENSMUST00000203926 160 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm44149-201ENSMUST00000204256 226 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm10264-201ENSMUST00000220589 429 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm26327-201ENSMUST00000093724 111 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm11065-201ENSMUST00000111462 228 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm24577-201ENSMUST00000158580 63 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm27761-201ENSMUST00000184091 131 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm37399-201ENSMUST00000195224 416 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm24043-201ENSMUST00000083108 116 ntBASIC1.86□□□□□ -2.11
Scn5aQ9JJV9 Gm11556-201ENSMUST00000120751 288 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm23435-201ENSMUST00000157183 156 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Mir7093-201ENSMUST00000184195 101 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm37054-201ENSMUST00000193481 543 ntBASIC1.85□□□□□ -2.11
Scn5aQ9JJV9 Gm26154-201ENSMUST00000102339 96 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Gm5329-201ENSMUST00000186898 463 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Gm25079-201ENSMUST00000082529 203 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.84□□□□□ -2.11
Scn5aQ9JJV9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm14307-201ENSMUST00000118930 291 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm14297-201ENSMUST00000129110 291 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm17148-201ENSMUST00000164702 249 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm26501-201ENSMUST00000178307 107 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Mir6376-201ENSMUST00000185149 131 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm29848-201ENSMUST00000203107 295 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm26446-201ENSMUST00000082455 103 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Gm24765-201ENSMUST00000083691 103 ntBASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Scn5aQ9JJV9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Mir701-201ENSMUST00000102208 109 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm14551-201ENSMUST00000120802 256 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm24799-201ENSMUST00000178431 79 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm28288-201ENSMUST00000191019 214 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm38238-201ENSMUST00000194334 346 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm43529-201ENSMUST00000199178 412 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Olfr197-201ENSMUST00000080031 926 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm26056-201ENSMUST00000083043 104 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm26175-201ENSMUST00000083794 131 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm25384-201ENSMUST00000157807 105 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm25982-201ENSMUST00000157920 101 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm27640-201ENSMUST00000184580 147 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm37029-201ENSMUST00000195773 239 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm45815-201ENSMUST00000220241 146 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Gm25475-201ENSMUST00000082825 180 ntBASIC1.83□□□□□ -2.12
Scn5aQ9JJV9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm14355-201ENSMUST00000117352 264 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm11254-201ENSMUST00000122368 653 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm23033-201ENSMUST00000157996 134 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms