Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm9402-201ENSMUST00000196849 388 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm43739-201ENSMUST00000198294 307 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Snord14a-201ENSMUST00000082807 87 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm26493-201ENSMUST00000083155 136 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm23011-201ENSMUST00000104148 132 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm25109-201ENSMUST00000122474 114 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm26089-201ENSMUST00000157898 107 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm25413-201ENSMUST00000158544 312 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.15□□□□□ -2.23
Lima1Q9ERG0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm35212-201ENSMUST00000196672 606 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm43914-201ENSMUST00000203592 594 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm25589-201ENSMUST00000082502 166 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Snora3-201ENSMUST00000083082 132 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm23453-201ENSMUST00000083326 106 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm22577-201ENSMUST00000083731 109 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.15□□□□□ -2.23
Lima1Q9ERG0 Gm25938-201ENSMUST00000104139 166 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm24896-201ENSMUST00000122741 135 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm25059-201ENSMUST00000157367 117 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm23589-201ENSMUST00000157660 105 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm24418-201ENSMUST00000177597 79 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm24639-201ENSMUST00000178518 79 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm23076-201ENSMUST00000179082 79 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm25077-201ENSMUST00000179157 79 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Gm27898-201ENSMUST00000183987 80 ntBASIC1.14□□□□□ -2.23
Lima1Q9ERG0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm12417-201ENSMUST00000119153 403 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm14972-201ENSMUST00000121780 364 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm25269-201ENSMUST00000122601 104 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Mir1904-201ENSMUST00000122702 80 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm22074-201ENSMUST00000158595 113 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm24084-201ENSMUST00000175173 137 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm23725-201ENSMUST00000177876 107 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Mir496b-201ENSMUST00000184935 113 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm37869-201ENSMUST00000193385 595 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm42570-201ENSMUST00000195937 292 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm44655-201ENSMUST00000207768 423 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm18854-201ENSMUST00000211196 329 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm40810-201ENSMUST00000219149 253 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Gm10092-201ENSMUST00000077110 180 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Mir221-201ENSMUST00000083488 95 ntBASIC1.13□□□□□ -2.23
Lima1Q9ERG0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Lima1Q9ERG0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm25876-201ENSMUST00000104329 119 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm25423-201ENSMUST00000157609 107 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm22510-201ENSMUST00000179304 79 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm26336-201ENSMUST00000179449 79 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm26390-201ENSMUST00000179628 79 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm28740-201ENSMUST00000186142 215 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm28926-201ENSMUST00000191063 680 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm43556-201ENSMUST00000196186 681 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm19441-201ENSMUST00000221545 330 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Lima1Q9ERG0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm14362-201ENSMUST00000121679 273 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm15254-201ENSMUST00000149567 273 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm24915-201ENSMUST00000157288 78 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Mir1967-201ENSMUST00000157789 82 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm23858-201ENSMUST00000158384 106 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm23090-201ENSMUST00000177331 78 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm22631-201ENSMUST00000179656 94 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Mir7014-201ENSMUST00000183853 63 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm45366-201ENSMUST00000209828 384 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms