Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm12102-201ENSMUST00000118251 604 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm13396-201ENSMUST00000120617 271 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm14362-201ENSMUST00000121679 273 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm14364-201ENSMUST00000129209 267 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm15254-201ENSMUST00000149567 273 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm23390-201ENSMUST00000157393 106 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm26150-201ENSMUST00000157426 151 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm24678-201ENSMUST00000158756 104 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm2962-201ENSMUST00000159266 336 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm24323-201ENSMUST00000175342 77 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm26914-201ENSMUST00000182262 223 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm27342-201ENSMUST00000183530 109 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm37089-201ENSMUST00000195616 129 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm42855-201ENSMUST00000197388 253 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm44429-201ENSMUST00000203542 186 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm44976-201ENSMUST00000205543 261 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm18598-201ENSMUST00000207724 597 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm18213-201ENSMUST00000207850 178 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 DQ267101-201ENSMUST00000082562 73 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm23969-201ENSMUST00000083324 74 ntBASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Pfdn1Q9CWM4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm25938-201ENSMUST00000104139 166 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm23586-201ENSMUST00000157657 123 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm25166-201ENSMUST00000158909 111 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm22403-201ENSMUST00000174919 84 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm23967-201ENSMUST00000175062 78 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm20874-201ENSMUST00000178356 663 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm27289-201ENSMUST00000183341 82 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Mir6411-201ENSMUST00000183556 108 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm37946-201ENSMUST00000192064 347 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm44449-201ENSMUST00000203610 153 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm44554-201ENSMUST00000208738 147 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.21□□□□□ -2.38
Pfdn1Q9CWM4 Gm24476-201ENSMUST00000157437 131 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm26487-201ENSMUST00000158022 94 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm26177-201ENSMUST00000178683 107 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm24390-201ENSMUST00000179578 62 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm44446-201ENSMUST00000204864 255 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm23462-201ENSMUST00000083264 104 ntBASIC0.2□□□□□ -2.38
Pfdn1Q9CWM4 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Mir883a-201ENSMUST00000104824 76 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm23605-201ENSMUST00000157255 127 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm25393-201ENSMUST00000157336 285 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm43026-201ENSMUST00000202972 325 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm5010-201ENSMUST00000213131 260 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm26326-201ENSMUST00000083070 129 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm23058-201ENSMUST00000093703 107 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Gm42736-201ENSMUST00000200723 1353 ntBASIC0.19□□□□□ -2.38
Pfdn1Q9CWM4 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 Gm28412-201ENSMUST00000187243 177 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 Gm25698-201ENSMUST00000082897 107 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.18□□□□□ -2.38
Pfdn1Q9CWM4 Gm23015-201ENSMUST00000104145 128 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm23230-201ENSMUST00000157298 133 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Mir3964-201ENSMUST00000174898 74 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Mir3569-201ENSMUST00000185080 58 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm42719-201ENSMUST00000197393 355 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm44088-201ENSMUST00000204595 237 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm40810-201ENSMUST00000219149 253 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm46993-201ENSMUST00000220708 259 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Pfdn1Q9CWM4 Gm24920-201ENSMUST00000083018 85 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms