Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm22270-201ENSMUST00000104034 132 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Mir881-201ENSMUST00000104844 78 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm12771-201ENSMUST00000120246 135 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm12617-201ENSMUST00000121268 381 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm25392-201ENSMUST00000157335 297 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm22527-201ENSMUST00000158816 106 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm25707-201ENSMUST00000175120 96 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm23963-201ENSMUST00000179603 77 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Mir7667-201ENSMUST00000183866 63 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm27505-201ENSMUST00000185071 110 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm43680-201ENSMUST00000199466 340 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm45859-201ENSMUST00000212794 214 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Gm25482-201ENSMUST00000083225 107 ntBASIC3.29□□□□□ -1.88
Ushbp1Q8R370 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm24582-201ENSMUST00000103967 103 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm22658-201ENSMUST00000104196 155 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm13729-201ENSMUST00000120328 406 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm14770-201ENSMUST00000122197 312 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm25270-201ENSMUST00000122606 138 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm26479-201ENSMUST00000122620 106 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm22099-201ENSMUST00000157925 123 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm8292-201ENSMUST00000162574 396 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Mir3106-201ENSMUST00000175401 82 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm27700-201ENSMUST00000185003 81 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm37923-201ENSMUST00000191624 161 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Ushbp1Q8R370 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ushbp1Q8R370 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Mir344c-201ENSMUST00000103919 92 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm25485-201ENSMUST00000104120 132 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm23836-201ENSMUST00000104434 129 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm12042-201ENSMUST00000120479 301 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm24908-201ENSMUST00000157294 127 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm23331-201ENSMUST00000157423 108 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm24358-201ENSMUST00000158424 288 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm22433-201ENSMUST00000158550 142 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm20630-201ENSMUST00000177387 551 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Mir7009-201ENSMUST00000184519 64 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm44337-201ENSMUST00000196553 114 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm43978-201ENSMUST00000203491 451 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ushbp1Q8R370 Gm14073-201ENSMUST00000117344 381 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm24601-201ENSMUST00000157970 143 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm25749-201ENSMUST00000175485 111 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm20660-201ENSMUST00000177515 289 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm29262-201ENSMUST00000190084 196 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm9795-201ENSMUST00000062156 693 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm22062-201ENSMUST00000082563 107 ntBASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ushbp1Q8R370 Mir499-201ENSMUST00000102357 79 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm13714-201ENSMUST00000117313 221 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm24937-201ENSMUST00000122597 134 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm23901-201ENSMUST00000157570 107 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm23545-201ENSMUST00000158205 104 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm24308-201ENSMUST00000177773 114 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gm23731-201ENSMUST00000083749 107 ntBASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Ushbp1Q8R370 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm23325-201ENSMUST00000157422 129 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm27396-201ENSMUST00000157708 58 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms