Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm37449-201ENSMUST00000193016 270 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm18658-201ENSMUST00000195558 270 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm43250-201ENSMUST00000196536 273 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm44473-201ENSMUST00000204039 152 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.82□□□□□ -1.96
CopaQ8CIE6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm23625-201ENSMUST00000082457 100 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm23055-201ENSMUST00000082805 94 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Gm23845-201ENSMUST00000083834 152 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
CopaQ8CIE6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.82□□□□□ -1.96
CopaQ8CIE6 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CopaQ8CIE6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CopaQ8CIE6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm12646-201ENSMUST00000119144 238 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm5396-201ENSMUST00000121222 532 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm27997-201ENSMUST00000184942 69 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.81□□□□□ -1.96
CopaQ8CIE6 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm24316-201ENSMUST00000083041 107 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Gm23847-201ENSMUST00000083829 110 ntBASIC2.81□□□□□ -1.96
CopaQ8CIE6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.8□□□□□ -1.96
CopaQ8CIE6 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm12550-201ENSMUST00000118478 329 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm3788-201ENSMUST00000119949 136 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm12042-201ENSMUST00000120479 301 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm14770-201ENSMUST00000122197 312 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm25450-201ENSMUST00000179144 107 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm37713-201ENSMUST00000191746 198 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm36946-201ENSMUST00000192706 435 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm43978-201ENSMUST00000203491 451 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm25141-201ENSMUST00000083177 107 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm22154-201ENSMUST00000083844 131 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Gm23040-201ENSMUST00000083869 163 ntBASIC2.8□□□□□ -1.96
CopaQ8CIE6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CopaQ8CIE6 Mir1195-201ENSMUST00000116818 98 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm6954-201ENSMUST00000117416 225 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm12304-201ENSMUST00000120312 385 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm11471-201ENSMUST00000121824 198 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm25543-201ENSMUST00000122678 312 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm2830-201ENSMUST00000140330 385 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm23232-201ENSMUST00000157300 105 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm23589-201ENSMUST00000157660 105 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm23474-201ENSMUST00000158884 75 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Snord53-201ENSMUST00000175146 78 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm23268-201ENSMUST00000175494 78 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm28744-201ENSMUST00000189939 340 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm37801-201ENSMUST00000194754 274 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Mir6375-201ENSMUST00000197176 95 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm44409-201ENSMUST00000198810 166 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm34314-201ENSMUST00000203622 367 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CopaQ8CIE6 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.79□□□□□ -1.96
CopaQ8CIE6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CopaQ8CIE6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm24122-201ENSMUST00000104107 132 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Mir872-201ENSMUST00000104728 81 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm22151-201ENSMUST00000116963 58 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm26156-201ENSMUST00000116999 123 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm13432-201ENSMUST00000118861 241 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm15272-201ENSMUST00000120865 233 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 DQ267100-201ENSMUST00000122600 72 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm20660-201ENSMUST00000177515 289 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm24388-201ENSMUST00000177872 107 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 436.3 ms