Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm26500-201ENSMUST00000101867 106 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm25466-201ENSMUST00000103995 132 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm23829-201ENSMUST00000157392 270 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm23474-201ENSMUST00000158884 75 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm22500-201ENSMUST00000158982 99 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm25450-201ENSMUST00000179144 107 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Mir6386-201ENSMUST00000183558 104 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm23370-202ENSMUST00000197008 129 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm44977-201ENSMUST00000205283 420 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm45150-201ENSMUST00000206051 467 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm44853-201ENSMUST00000209070 250 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Gm26314-201ENSMUST00000083891 107 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vps53Q8CCB4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm26473-201ENSMUST00000116763 127 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm24358-201ENSMUST00000158424 288 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Mir7068-201ENSMUST00000183439 74 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm37763-201ENSMUST00000193445 120 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm42570-201ENSMUST00000195937 292 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm44320-201ENSMUST00000199276 86 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.18□□□□□ -1.9
Vps53Q8CCB4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm23128-201ENSMUST00000104257 132 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm24443-201ENSMUST00000157242 132 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm22560-201ENSMUST00000157332 120 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm24879-201ENSMUST00000158386 143 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm23409-201ENSMUST00000158516 237 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm24736-201ENSMUST00000158862 130 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm25707-201ENSMUST00000175120 96 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Mir3076-201ENSMUST00000175415 60 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm27869-201ENSMUST00000184327 122 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm23128-202ENSMUST00000196578 133 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm43991-201ENSMUST00000203751 274 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm18000-201ENSMUST00000212153 800 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm25078-201ENSMUST00000082530 107 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Mir32-201ENSMUST00000083610 70 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm25651-201ENSMUST00000083782 119 ntBASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Vps53Q8CCB4 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm5937-201ENSMUST00000119715 643 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm25470-201ENSMUST00000175576 111 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm22062-201ENSMUST00000082563 107 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Snord14d-201ENSMUST00000083424 86 ntBASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Vps53Q8CCB4 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.15□□□□□ -1.9
Vps53Q8CCB4 Gm15010-201ENSMUST00000117153 407 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm15714-201ENSMUST00000117168 250 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm22330-201ENSMUST00000158068 115 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm22416-201ENSMUST00000158590 88 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm25119-201ENSMUST00000158815 88 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm24818-201ENSMUST00000175093 161 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm28921-201ENSMUST00000190219 378 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm42672-201ENSMUST00000197821 352 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm45879-201ENSMUST00000212521 392 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm40810-201ENSMUST00000219149 253 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm26458-201ENSMUST00000082832 128 ntBASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Vps53Q8CCB4 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm25500-201ENSMUST00000104426 123 ntBASIC3.14□□□□□ -1.91
Vps53Q8CCB4 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms