Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23907-201ENSMUST00000104595 189 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm14020-201ENSMUST00000118165 662 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm24314-201ENSMUST00000158274 123 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm22612-201ENSMUST00000158293 101 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm44703-201ENSMUST00000205724 248 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm23445-201ENSMUST00000082800 107 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Snord61-201ENSMUST00000083176 71 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim47Q8C0E3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.18□□□□□ -1.74
Trim47Q8C0E3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm13560-201ENSMUST00000121865 329 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm12013-201ENSMUST00000121971 155 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm24244-201ENSMUST00000157317 130 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm22510-201ENSMUST00000179304 79 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm26336-201ENSMUST00000179449 79 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm26390-201ENSMUST00000179628 79 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm18665-201ENSMUST00000189783 270 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Trbv18-201ENSMUST00000194256 294 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm23370-202ENSMUST00000197008 129 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm18429-201ENSMUST00000198707 421 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm44294-201ENSMUST00000205090 728 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 mt-Ta-201ENSMUST00000082398 69 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Snora7a-201ENSMUST00000082629 140 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm22827-201ENSMUST00000083766 107 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm43877-201ENSMUST00000205029 2238 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.17□□□□□ -1.74
Trim47Q8C0E3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm22840-201ENSMUST00000158444 136 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm27520-201ENSMUST00000184872 81 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm46233-201ENSMUST00000217831 449 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 AC122834.1-201ENSMUST00000227182 425 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Gm4945-201ENSMUST00000075152 453 ntBASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim47Q8C0E3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm26091-201ENSMUST00000122704 82 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm20399-201ENSMUST00000174652 132 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Mir6385-201ENSMUST00000184295 105 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm27308-201ENSMUST00000184807 233 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm37343-201ENSMUST00000192542 111 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm45687-201ENSMUST00000209454 155 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm22299-201ENSMUST00000082663 136 ntBASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim47Q8C0E3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm24127-201ENSMUST00000104110 130 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm15268-201ENSMUST00000118845 352 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm28010-201ENSMUST00000179485 126 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm22686-201ENSMUST00000082847 100 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.14□□□□□ -1.75
Trim47Q8C0E3 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm23256-201ENSMUST00000102235 110 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm26140-201ENSMUST00000103807 110 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm24096-201ENSMUST00000103905 110 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm14687-201ENSMUST00000120206 363 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm25678-201ENSMUST00000174984 73 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm24811-201ENSMUST00000175313 100 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm22908-201ENSMUST00000177620 110 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm28828-201ENSMUST00000186601 696 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm37037-201ENSMUST00000194475 424 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Gm22978-201ENSMUST00000082607 160 ntBASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms