Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Mir6416-201ENSMUST00000183664 117 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim35Q8C006 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim35Q8C006 Gm26330-201ENSMUST00000082817 104 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 Mir155-201ENSMUST00000083463 65 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 Mir338-201ENSMUST00000083666 98 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 Gm25821-201ENSMUST00000093657 133 ntBASIC4.89□□□□□ -1.63
Trim35Q8C006 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim35Q8C006 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Trim35Q8C006 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim35Q8C006 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim35Q8C006 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim35Q8C006 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim35Q8C006 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim35Q8C006 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 AC157570.1-201ENSMUST00000218052 3778 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Gm25907-201ENSMUST00000158486 125 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Gm27528-201ENSMUST00000183544 205 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Gm27492-201ENSMUST00000185194 187 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Gm2497-201ENSMUST00000189539 601 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Mir137-201ENSMUST00000083635 73 ntBASIC4.88□□□□□ -1.63
Trim35Q8C006 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim35Q8C006 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim35Q8C006 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim35Q8C006 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim35Q8C006 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Trim35Q8C006 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm23746-201ENSMUST00000104229 125 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm13172-201ENSMUST00000118685 256 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm25436-201ENSMUST00000158275 145 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm26404-201ENSMUST00000158498 109 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm24878-201ENSMUST00000158782 104 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim35Q8C006 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm27818-201ENSMUST00000184536 159 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 mt-Tn-201ENSMUST00000082399 71 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Mir5117-201ENSMUST00000083226 84 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim35Q8C006 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim35Q8C006 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.87□□□□□ -1.63
Trim35Q8C006 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim35Q8C006 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm8129-201ENSMUST00000118230 213 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm12379-201ENSMUST00000119607 391 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm22277-201ENSMUST00000157204 277 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm22560-201ENSMUST00000157332 120 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm22078-201ENSMUST00000157593 103 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm25012-201ENSMUST00000158396 164 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Supt4b-201ENSMUST00000214434 351 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Trim35Q8C006 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim35Q8C006 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.86□□□□□ -1.63
Trim35Q8C006 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim35Q8C006 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim35Q8C006 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim35Q8C006 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Gm12039-201ENSMUST00000118219 180 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Gm26153-201ENSMUST00000157433 127 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Mir7056-201ENSMUST00000183776 59 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Gm27544-201ENSMUST00000185069 155 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Gm23626-201ENSMUST00000082458 133 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Mir340-201ENSMUST00000083483 98 ntBASIC4.85□□□□□ -1.63
Trim35Q8C006 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim35Q8C006 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim35Q8C006 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim35Q8C006 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim35Q8C006 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim35Q8C006 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm13567-201ENSMUST00000118026 247 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms