Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22051-201ENSMUST00000117002 127 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12086-201ENSMUST00000120863 228 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24717-201ENSMUST00000157522 124 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24716-201ENSMUST00000157524 104 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm44355-201ENSMUST00000200417 104 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.59□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sh3rf1Q69ZI1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Mir450b-201ENSMUST00000102095 82 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm12954-201ENSMUST00000118610 611 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm14402-201ENSMUST00000122217 508 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Mir7062-201ENSMUST00000185038 66 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23370-202ENSMUST00000197008 129 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm44425-201ENSMUST00000203739 429 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22421-201ENSMUST00000083058 107 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.58□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm12443-201ENSMUST00000122308 323 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23667-201ENSMUST00000157466 120 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22310-201ENSMUST00000157509 116 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22845-201ENSMUST00000157712 104 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25267-201ENSMUST00000158522 63 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25069-201ENSMUST00000175238 86 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm44429-201ENSMUST00000203542 186 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22509-201ENSMUST00000082775 107 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25205-201ENSMUST00000082841 103 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24929-201ENSMUST00000083403 139 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm13756-201ENSMUST00000117618 222 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm16005-201ENSMUST00000120515 269 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm2830-201ENSMUST00000140330 385 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23326-201ENSMUST00000157419 105 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm28010-201ENSMUST00000179485 126 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm29452-201ENSMUST00000187996 313 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Gm9251-201ENSMUST00000197202 628 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Mir767-201ENSMUST00000103256 107 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm13076-201ENSMUST00000118041 204 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm11704-201ENSMUST00000120031 214 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23434-201ENSMUST00000157179 100 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24440-201ENSMUST00000157236 63 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22380-201ENSMUST00000157479 95 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Mir1934-201ENSMUST00000158127 83 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24512-201ENSMUST00000174963 65 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23860-201ENSMUST00000179446 132 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm28825-201ENSMUST00000186233 238 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm37545-201ENSMUST00000186512 148 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm19620-201ENSMUST00000195972 434 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms