Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm22654-201ENSMUST00000157874 105 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc3Q64519 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Gm23793-201ENSMUST00000179396 117 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Gm25121-201ENSMUST00000179846 79 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Gm29229-201ENSMUST00000188874 323 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
Sdc3Q64519 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.16□□□□□ -2.06
Sdc3Q64519 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Gm25651-201ENSMUST00000083782 119 ntBASIC2.16□□□□□ -2.06
Sdc3Q64519 Gm14972-201ENSMUST00000121780 364 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm22227-201ENSMUST00000157356 259 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm25910-201ENSMUST00000157620 140 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm24769-201ENSMUST00000158506 129 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm25488-201ENSMUST00000158728 118 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm24737-201ENSMUST00000158861 100 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm16584-201ENSMUST00000159267 189 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Mir28b-201ENSMUST00000175399 80 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm27410-201ENSMUST00000183851 115 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.15□□□□□ -2.07
Sdc3Q64519 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm24313-201ENSMUST00000082561 133 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm23453-201ENSMUST00000083326 106 ntBASIC2.15□□□□□ -2.07
Sdc3Q64519 Gm25485-201ENSMUST00000104120 132 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm24338-201ENSMUST00000104205 127 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm23987-201ENSMUST00000117039 129 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm13885-201ENSMUST00000117569 187 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm14652-201ENSMUST00000118479 235 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm5396-201ENSMUST00000121222 532 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm26280-201ENSMUST00000157096 101 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm27926-201ENSMUST00000157180 66 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm25982-201ENSMUST00000157920 101 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm24724-201ENSMUST00000158230 107 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Snord11-201ENSMUST00000158468 84 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm9830-201ENSMUST00000178509 357 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm28661-201ENSMUST00000188231 681 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm34015-201ENSMUST00000194908 451 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Mir7217-201ENSMUST00000200304 62 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm19572-201ENSMUST00000214326 338 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm22062-201ENSMUST00000082563 107 ntBASIC2.14□□□□□ -2.07
Sdc3Q64519 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Sdc3Q64519 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm22021-201ENSMUST00000104353 107 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm24275-201ENSMUST00000116780 146 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm6956-201ENSMUST00000134724 546 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm25888-201ENSMUST00000157778 302 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm24053-201ENSMUST00000158620 105 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm28951-201ENSMUST00000190742 313 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm32033-201ENSMUST00000193483 339 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm2829-201ENSMUST00000213121 499 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm25929-201ENSMUST00000082784 107 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Mir30d-201ENSMUST00000083503 82 ntBASIC2.13□□□□□ -2.07
Sdc3Q64519 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Sdc3Q64519 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm14624-201ENSMUST00000117746 192 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm11798-201ENSMUST00000119150 421 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm13396-201ENSMUST00000120617 271 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm25269-201ENSMUST00000122601 104 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.12□□□□□ -2.07
Sdc3Q64519 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm22491-201ENSMUST00000157190 102 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm23589-201ENSMUST00000157660 105 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm25711-201ENSMUST00000158633 128 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm22264-201ENSMUST00000178200 107 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Mir6346-201ENSMUST00000183982 81 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm42570-201ENSMUST00000195937 292 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm42807-201ENSMUST00000200141 329 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm44811-201ENSMUST00000209120 228 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm7214-201ENSMUST00000222428 272 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.12□□□□□ -2.07
Sdc3Q64519 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm23721-201ENSMUST00000083005 107 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sdc3Q64519 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc3Q64519 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sdc3Q64519 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.12□□□□□ -2.07
Sdc3Q64519 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.11□□□□□ -2.07
Sdc3Q64519 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Sdc3Q64519 Gm14296-202ENSMUST00000108931 750 ntBASIC2.11□□□□□ -2.07
Sdc3Q64519 Gm22678-201ENSMUST00000116974 101 ntBASIC2.11□□□□□ -2.07
Sdc3Q64519 Gm12721-201ENSMUST00000120621 268 ntBASIC2.11□□□□□ -2.07
Sdc3Q64519 Gm14980-201ENSMUST00000121247 736 ntBASIC2.11□□□□□ -2.07
Sdc3Q64519 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms