Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim28Q62318 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim28Q62318 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim28Q62318 Mir1195-201ENSMUST00000116818 98 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm14770-201ENSMUST00000122197 312 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim28Q62318 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim28Q62318 Gm25599-201ENSMUST00000157816 103 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm23640-201ENSMUST00000157860 104 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Mir669k-201ENSMUST00000177742 127 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm25673-201ENSMUST00000179957 127 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm37713-201ENSMUST00000191746 198 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm37807-201ENSMUST00000194310 190 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim28Q62318 Gm5002-201ENSMUST00000207145 223 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm18015-201ENSMUST00000214879 316 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm22507-201ENSMUST00000082773 160 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Gm22297-201ENSMUST00000083312 106 ntBASIC3.53□□□□□ -1.84
Trim28Q62318 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Trim28Q62318 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trim28Q62318 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim28Q62318 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim28Q62318 Mir344c-201ENSMUST00000103919 92 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm25421-201ENSMUST00000104218 164 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm22957-201ENSMUST00000122511 123 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm15733-201ENSMUST00000132957 242 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim28Q62318 Gm22450-201ENSMUST00000179641 107 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm27465-201ENSMUST00000184290 91 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm43264-201ENSMUST00000202284 325 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.52□□□□□ -1.85
Trim28Q62318 Gm22806-201ENSMUST00000082738 136 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm25698-201ENSMUST00000082897 107 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm26071-201ENSMUST00000083261 107 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm22353-201ENSMUST00000083918 136 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Gm24521-201ENSMUST00000083958 107 ntBASIC3.52□□□□□ -1.85
Trim28Q62318 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim28Q62318 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm25728-201ENSMUST00000104525 159 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Snord19-201ENSMUST00000104609 76 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm9119-201ENSMUST00000118866 495 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.51□□□□□ -1.85
Trim28Q62318 Gm22330-201ENSMUST00000158068 115 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm24131-201ENSMUST00000158539 107 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm24816-201ENSMUST00000175311 151 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm23002-201ENSMUST00000179221 107 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm27285-201ENSMUST00000183875 127 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm45452-201ENSMUST00000210905 177 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim28Q62318 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Mir32-201ENSMUST00000083610 70 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Snord7-201ENSMUST00000083781 97 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.51□□□□□ -1.85
Trim28Q62318 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim28Q62318 Mir693-201ENSMUST00000102187 89 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm11471-201ENSMUST00000121824 198 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm25107-201ENSMUST00000122472 129 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm22113-201ENSMUST00000158343 104 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim28Q62318 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim28Q62318 Mir3076-201ENSMUST00000175415 60 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm25024-201ENSMUST00000179667 104 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm27786-201ENSMUST00000184337 70 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim28Q62318 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm18188-201ENSMUST00000219386 478 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim28Q62318 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm23095-201ENSMUST00000083446 107 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Trim28Q62318 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.5□□□□□ -1.85
Trim28Q62318 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim28Q62318 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Trim28Q62318 Gm22782-201ENSMUST00000104082 132 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm25938-201ENSMUST00000104139 166 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm23803-201ENSMUST00000104610 132 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm14894-201ENSMUST00000117170 270 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm13210-201ENSMUST00000121483 273 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm15065-201ENSMUST00000121699 273 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm26026-201ENSMUST00000122726 123 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm25283-201ENSMUST00000157272 77 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm25392-201ENSMUST00000157335 297 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm22097-201ENSMUST00000157929 278 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm17117-201ENSMUST00000163665 299 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Gm24304-201ENSMUST00000177635 107 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Mir6335-201ENSMUST00000184081 98 ntBASIC3.49□□□□□ -1.85
Trim28Q62318 Mir6540-201ENSMUST00000184886 108 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms