Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm23462-201ENSMUST00000083264 104 ntBASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Gm25579-201ENSMUST00000083407 106 ntBASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Trav6-2Q5R1I4 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm14670-201ENSMUST00000117327 337 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm11386-201ENSMUST00000117761 347 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm12646-201ENSMUST00000119144 238 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm25269-201ENSMUST00000122601 104 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm25279-201ENSMUST00000122608 133 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm24419-201ENSMUST00000157875 332 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm25996-201ENSMUST00000175393 117 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm22308-201ENSMUST00000177609 107 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm24388-201ENSMUST00000177872 107 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm26430-201ENSMUST00000178054 107 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm26180-201ENSMUST00000179942 107 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Mir195b-201ENSMUST00000184814 97 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm28927-201ENSMUST00000191528 272 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm37557-201ENSMUST00000191640 139 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm46312-201ENSMUST00000220961 420 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm24623-201ENSMUST00000082616 194 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm25801-201ENSMUST00000082638 106 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm22997-201ENSMUST00000082845 107 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm24037-201ENSMUST00000082871 180 ntBASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav6-2Q5R1I4 Gm25832-201ENSMUST00000104140 130 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm23169-201ENSMUST00000157157 112 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm25888-201ENSMUST00000157778 302 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm23557-201ENSMUST00000157820 138 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm22654-201ENSMUST00000157874 105 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm24498-201ENSMUST00000158445 102 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm25368-201ENSMUST00000158847 131 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm23813-201ENSMUST00000175153 77 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm24572-201ENSMUST00000175505 88 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm27588-201ENSMUST00000185096 263 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm37128-201ENSMUST00000192599 232 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm42622-201ENSMUST00000197229 355 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm42672-201ENSMUST00000197821 352 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm3724-201ENSMUST00000197957 349 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm45730-201ENSMUST00000212560 395 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm45791-201ENSMUST00000212908 352 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Gm25813-201ENSMUST00000082748 191 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Mir148b-201ENSMUST00000083626 97 ntBASIC1.53□□□□□ -2.16
Trav6-2Q5R1I4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm7164-201ENSMUST00000117503 450 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm13885-201ENSMUST00000117569 187 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm25384-201ENSMUST00000157807 105 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm24211-201ENSMUST00000158264 107 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm25012-201ENSMUST00000158396 164 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Mir6399-201ENSMUST00000184050 84 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm40810-201ENSMUST00000219149 253 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm23627-201ENSMUST00000082459 107 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm22502-201ENSMUST00000082488 107 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm22977-201ENSMUST00000082615 107 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm24149-201ENSMUST00000082757 107 ntBASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trav6-2Q5R1I4 Gm22656-201ENSMUST00000104199 171 ntBASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Snord98-201ENSMUST00000116819 65 ntBASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Gm14624-201ENSMUST00000117746 192 ntBASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Gm25121-201ENSMUST00000179846 79 ntBASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Gm27317-201ENSMUST00000183533 95 ntBASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav6-2Q5R1I4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 190 ms