Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mir3061-201ENSMUST00000175129 91 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm18696-201ENSMUST00000220103 274 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm22469-201ENSMUST00000104118 133 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25011-201ENSMUST00000158398 126 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25044-201ENSMUST00000158603 104 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28110-201ENSMUST00000185782 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29057-201ENSMUST00000186468 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28737-201ENSMUST00000186808 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29147-201ENSMUST00000186846 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29118-201ENSMUST00000186908 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28433-201ENSMUST00000187085 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29227-201ENSMUST00000187139 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28759-201ENSMUST00000187621 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28831-201ENSMUST00000187739 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29034-201ENSMUST00000188099 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28752-201ENSMUST00000188340 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28474-201ENSMUST00000188501 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28569-201ENSMUST00000188748 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28120-201ENSMUST00000188812 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28369-201ENSMUST00000188993 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28537-201ENSMUST00000189026 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28861-201ENSMUST00000189681 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28717-201ENSMUST00000189950 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29180-201ENSMUST00000190003 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29575-201ENSMUST00000190597 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29631-201ENSMUST00000191065 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28160-201ENSMUST00000191229 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29469-201ENSMUST00000191448 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm37658-201ENSMUST00000192672 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm37129-201ENSMUST00000195791 315 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29754-201ENSMUST00000206269 358 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25589-201ENSMUST00000082502 166 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25357-201ENSMUST00000082745 72 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Snord118-201ENSMUST00000082965 135 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm24536-201ENSMUST00000083144 107 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.26□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Mir467h-201ENSMUST00000116759 121 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm26303-201ENSMUST00000116845 119 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm14600-201ENSMUST00000121032 630 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm20613-201ENSMUST00000175828 345 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Snord33-201ENSMUST00000083694 84 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.25□□□□□ -2.37
Trav6d-4Q5R1I0 Gm14624-201ENSMUST00000117746 192 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm15365-201ENSMUST00000122392 300 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm20438-201ENSMUST00000174441 329 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm24388-201ENSMUST00000177872 107 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm43602-201ENSMUST00000196772 300 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23452-201ENSMUST00000083327 107 ntBASIC0.24□□□□□ -2.37
Trav6d-4Q5R1I0 Gm15193-201ENSMUST00000120224 865 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm24896-201ENSMUST00000122741 135 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm24480-201ENSMUST00000157442 103 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm25663-201ENSMUST00000157698 135 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm24668-201ENSMUST00000158935 104 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm26365-201ENSMUST00000179177 94 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23370-201ENSMUST00000199545 130 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm44462-201ENSMUST00000199696 129 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23462-201ENSMUST00000083264 104 ntBASIC0.23□□□□□ -2.37
Trav6d-4Q5R1I0 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.22□□□□□ -2.37
Trav6d-4Q5R1I0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Trav6d-4Q5R1I0 Gm11862-201ENSMUST00000119678 659 ntBASIC0.22□□□□□ -2.37
Trav6d-4Q5R1I0 Gm11358-201ENSMUST00000122310 373 ntBASIC0.22□□□□□ -2.37
Trav6d-4Q5R1I0 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms