Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm29005-201ENSMUST00000186773 320 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm44282-201ENSMUST00000203199 190 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm45907-201ENSMUST00000213023 193 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm46312-201ENSMUST00000220961 420 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm25651-201ENSMUST00000083782 119 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm24338-201ENSMUST00000104205 127 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm25529-201ENSMUST00000104850 92 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm13714-201ENSMUST00000117313 221 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm11598-201ENSMUST00000119257 357 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm15536-201ENSMUST00000121411 114 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm24191-201ENSMUST00000157977 122 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm25371-201ENSMUST00000158162 101 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm23854-201ENSMUST00000158378 108 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm22510-201ENSMUST00000179304 79 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm26336-201ENSMUST00000179449 79 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm26390-201ENSMUST00000179628 79 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm38280-201ENSMUST00000192610 158 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm24623-201ENSMUST00000082616 194 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Gm26457-201ENSMUST00000082678 78 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Snora3-201ENSMUST00000083082 132 ntBASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-3Q5R1C3 Mir653-201ENSMUST00000102402 85 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm22193-201ENSMUST00000116868 76 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm22221-201ENSMUST00000157362 103 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm25914-201ENSMUST00000157618 153 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm26501-201ENSMUST00000178307 107 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm27959-201ENSMUST00000185172 111 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm37658-201ENSMUST00000192672 315 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm42857-201ENSMUST00000200823 339 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm24977-201ENSMUST00000083106 163 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Mir221-201ENSMUST00000083488 95 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.18□□□□□ -2.22
Trav3-3Q5R1C3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm25168-201ENSMUST00000104189 132 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm23212-201ENSMUST00000122718 60 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm24901-201ENSMUST00000158125 110 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm25163-201ENSMUST00000158905 104 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Mir7081-201ENSMUST00000184490 75 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm8151-201ENSMUST00000184817 871 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Trbv22-201ENSMUST00000191697 291 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm22972-201ENSMUST00000083297 131 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Mir340-201ENSMUST00000083483 98 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm25859-201ENSMUST00000083710 91 ntBASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav3-3Q5R1C3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm26405-201ENSMUST00000158495 100 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm9156-201ENSMUST00000189660 463 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm34073-201ENSMUST00000195736 212 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm44181-201ENSMUST00000203106 483 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm44429-201ENSMUST00000203542 186 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms