Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm24907-201ENSMUST00000116932 128 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm23169-201ENSMUST00000157157 112 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm25625-201ENSMUST00000157221 96 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm23331-201ENSMUST00000157423 108 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm25012-201ENSMUST00000158396 164 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.76□□□□□ -2.13
Usp28Q5I043 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm21815-201ENSMUST00000178213 664 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm20874-201ENSMUST00000178356 663 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm9830-201ENSMUST00000178509 357 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm25457-201ENSMUST00000179509 107 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.76□□□□□ -2.13
Usp28Q5I043 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm44794-201ENSMUST00000206550 411 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm18991-201ENSMUST00000209225 746 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.76□□□□□ -2.13
Usp28Q5I043 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Usp28Q5I043 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm24481-201ENSMUST00000157210 102 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm22603-201ENSMUST00000157603 96 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm22535-201ENSMUST00000158174 119 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm25486-201ENSMUST00000158726 63 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm24810-201ENSMUST00000175317 70 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm24388-201ENSMUST00000177872 107 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Usp28Q5I043 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm27588-201ENSMUST00000185096 263 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm37054-201ENSMUST00000193481 543 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm43723-201ENSMUST00000196886 189 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm45315-201ENSMUST00000209283 333 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm40810-201ENSMUST00000219149 253 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Usp28Q5I043 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.75□□□□□ -2.13
Usp28Q5I043 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Usp28Q5I043 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Snord98-201ENSMUST00000116819 65 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm14269-201ENSMUST00000120455 306 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm24892-201ENSMUST00000122747 104 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.74□□□□□ -2.13
Usp28Q5I043 U6.1-201ENSMUST00000157443 101 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm25384-201ENSMUST00000157807 105 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm25996-201ENSMUST00000175393 117 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm23191-201ENSMUST00000179147 107 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm28414-201ENSMUST00000190111 294 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm42570-201ENSMUST00000195937 292 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm45375-201ENSMUST00000210338 280 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm6109-201ENSMUST00000223297 348 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm24151-201ENSMUST00000082758 141 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Mir148b-201ENSMUST00000083626 97 ntBASIC1.74□□□□□ -2.13
Usp28Q5I043 Gm3788-201ENSMUST00000119949 136 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm15281-201ENSMUST00000125181 351 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm23381-201ENSMUST00000157676 94 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm23557-201ENSMUST00000157820 138 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm22654-201ENSMUST00000157874 105 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm21978-201ENSMUST00000179696 377 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Usp28Q5I043 Mir6355-201ENSMUST00000183687 106 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Mir7093-201ENSMUST00000184195 101 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm38050-201ENSMUST00000191904 238 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm37128-201ENSMUST00000192599 232 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm44182-201ENSMUST00000204052 115 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm45403-201ENSMUST00000209453 276 ntBASIC1.73□□□□□ -2.13
Usp28Q5I043 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.73□□□□□ -2.13
Usp28Q5I043 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.73□□□□□ -2.13
Usp28Q5I043 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Usp28Q5I043 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Usp28Q5I043 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Usp28Q5I043 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm14296-202ENSMUST00000108931 750 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm13672-201ENSMUST00000117554 459 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm13432-201ENSMUST00000118861 241 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm25269-201ENSMUST00000122601 104 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm25970-201ENSMUST00000157165 86 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm22665-201ENSMUST00000158720 275 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms