Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm15065-201ENSMUST00000121699 273 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm26479-201ENSMUST00000122620 106 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm24761-201ENSMUST00000179589 127 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm24488-201ENSMUST00000179934 127 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm25701-201ENSMUST00000179988 127 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm26431-201ENSMUST00000180199 127 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm37449-201ENSMUST00000193016 270 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm18658-201ENSMUST00000195558 270 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm38088-201ENSMUST00000195829 241 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm43978-201ENSMUST00000203491 451 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm40810-201ENSMUST00000219149 253 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf180Q3U827 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf180Q3U827 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm23803-201ENSMUST00000104610 132 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm12858-201ENSMUST00000121913 208 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm43512-201ENSMUST00000198495 176 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm44490-201ENSMUST00000198566 127 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm25202-201ENSMUST00000082838 191 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Gm23731-201ENSMUST00000083749 107 ntBASIC3.5□□□□□ -1.85
Rnf180Q3U827 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rnf180Q3U827 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm23889-201ENSMUST00000122689 104 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm22988-201ENSMUST00000122759 144 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm26186-201ENSMUST00000157689 125 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm22803-201ENSMUST00000158049 283 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm28849-201ENSMUST00000188127 174 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm28330-201ENSMUST00000190353 171 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm37923-201ENSMUST00000191624 161 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm44337-201ENSMUST00000196553 114 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm19563-201ENSMUST00000222031 270 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 Gm23453-201ENSMUST00000083326 106 ntBASIC3.49□□□□□ -1.85
Rnf180Q3U827 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rnf180Q3U827 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Rnf180Q3U827 Mir881-201ENSMUST00000104844 78 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm24308-201ENSMUST00000177773 114 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm24799-201ENSMUST00000178431 79 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm25939-201ENSMUST00000179876 191 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm27220-201ENSMUST00000183453 262 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Mir6336-201ENSMUST00000183581 130 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm5899-201ENSMUST00000071770 270 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Rnf180Q3U827 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Rnf180Q3U827 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Rnf180Q3U827 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.48□□□□□ -1.85
Rnf180Q3U827 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm24379-201ENSMUST00000122695 86 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm23901-201ENSMUST00000157570 107 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm23559-201ENSMUST00000157824 103 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm23864-201ENSMUST00000177607 107 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Mir6402-201ENSMUST00000183406 80 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Mir7026-201ENSMUST00000184384 67 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm37089-201ENSMUST00000195616 129 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm45859-201ENSMUST00000212794 214 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm24950-201ENSMUST00000082768 191 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm25482-201ENSMUST00000083225 107 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm23971-201ENSMUST00000083317 191 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm23849-201ENSMUST00000083833 191 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm26316-201ENSMUST00000083886 191 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Snora33-201ENSMUST00000093556 129 ntBASIC3.47□□□□□ -1.85
Rnf180Q3U827 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Rnf180Q3U827 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm12934-201ENSMUST00000119221 343 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm13433-201ENSMUST00000121701 240 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm22984-201ENSMUST00000122751 122 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm24726-201ENSMUST00000158232 121 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm24177-201ENSMUST00000158927 131 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm23289-201ENSMUST00000175615 108 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm28848-201ENSMUST00000189984 168 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm29262-201ENSMUST00000190084 196 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm9795-201ENSMUST00000062156 693 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Gm10298-201ENSMUST00000074801 265 ntBASIC3.46□□□□□ -1.86
Rnf180Q3U827 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Rnf180Q3U827 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms