Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.29□□□□□ -2.2
Trim43aQ3TL54 Gm22149-201ENSMUST00000104442 136 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm24892-201ENSMUST00000122747 104 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm23124-201ENSMUST00000157650 107 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm26363-201ENSMUST00000158866 83 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm22851-201ENSMUST00000178741 94 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm25074-201ENSMUST00000178782 94 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm27490-201ENSMUST00000184754 128 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm42774-201ENSMUST00000198854 283 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm17906-201ENSMUST00000202480 901 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm22980-201ENSMUST00000082608 70 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm22572-201ENSMUST00000082985 105 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Gm24252-201ENSMUST00000083700 132 ntBASIC1.28□□□□□ -2.2
Trim43aQ3TL54 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm15010-201ENSMUST00000117153 407 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm13804-201ENSMUST00000119552 172 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm23000-201ENSMUST00000157083 139 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm24481-201ENSMUST00000157210 102 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm24480-201ENSMUST00000157442 103 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm24962-201ENSMUST00000157917 109 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm23317-201ENSMUST00000157999 129 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm20477-201ENSMUST00000174028 280 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Mir3968-201ENSMUST00000175355 100 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm21754-201ENSMUST00000177550 479 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm37923-201ENSMUST00000191624 161 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm43914-201ENSMUST00000203592 594 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm44654-201ENSMUST00000208052 329 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Snora3-201ENSMUST00000083082 132 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.27□□□□□ -2.21
Trim43aQ3TL54 Gm12806-201ENSMUST00000119384 268 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm24598-201ENSMUST00000122510 74 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm23329-201ENSMUST00000157415 108 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm23589-201ENSMUST00000157660 105 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm25413-201ENSMUST00000158544 312 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm29134-201ENSMUST00000186579 126 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm28337-201ENSMUST00000190425 666 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm31123-201ENSMUST00000192094 666 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm9402-201ENSMUST00000196849 388 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trim43aQ3TL54 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm22577-201ENSMUST00000083731 109 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.26□□□□□ -2.21
Trim43aQ3TL54 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm25059-201ENSMUST00000157367 117 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm23083-201ENSMUST00000157851 116 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm23339-201ENSMUST00000158962 139 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm24154-201ENSMUST00000175261 130 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Trbv22-201ENSMUST00000191697 291 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm45658-201ENSMUST00000209197 580 ntBASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim43aQ3TL54 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm24079-201ENSMUST00000104352 132 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm24896-201ENSMUST00000122741 135 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm26029-201ENSMUST00000158659 132 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm24418-201ENSMUST00000177597 79 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm24639-201ENSMUST00000178518 79 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm23076-201ENSMUST00000179082 79 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm25077-201ENSMUST00000179157 79 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Mir7059-201ENSMUST00000184825 59 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm44923-201ENSMUST00000206673 85 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gm23453-201ENSMUST00000083326 106 ntBASIC1.24□□□□□ -2.21
Trim43aQ3TL54 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trim43aQ3TL54 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm25109-201ENSMUST00000122474 114 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm26089-201ENSMUST00000157898 107 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm20613-201ENSMUST00000175828 345 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.23□□□□□ -2.21
Trim43aQ3TL54 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm43739-201ENSMUST00000198294 307 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm25589-201ENSMUST00000082502 166 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm25475-201ENSMUST00000082825 180 ntBASIC1.23□□□□□ -2.21
Trim43aQ3TL54 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm25876-201ENSMUST00000104329 119 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 154.1 ms