Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.73□□□□□ -1.97
Col28a1Q2UY11 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm5937-201ENSMUST00000119715 643 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm16533-201ENSMUST00000140035 228 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm22330-201ENSMUST00000158068 115 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm22521-201ENSMUST00000158272 134 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Nron-204ENSMUST00000158971 370 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm24084-201ENSMUST00000175173 137 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Mir7118-201ENSMUST00000197760 61 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm44859-201ENSMUST00000207831 94 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.72□□□□□ -1.97
Col28a1Q2UY11 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm22062-201ENSMUST00000082563 107 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm23042-201ENSMUST00000083866 101 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm25257-201ENSMUST00000083907 110 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.72□□□□□ -1.97
Col28a1Q2UY11 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.71□□□□□ -1.97
Col28a1Q2UY11 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
Col28a1Q2UY11 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm13355-201ENSMUST00000117996 317 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm12797-201ENSMUST00000118645 273 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm12617-201ENSMUST00000121268 381 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm16354-201ENSMUST00000155376 150 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm22315-201ENSMUST00000158010 143 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm24392-201ENSMUST00000158136 103 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm24006-201ENSMUST00000158462 132 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm23209-201ENSMUST00000158667 110 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm24667-201ENSMUST00000158938 103 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm17052-201ENSMUST00000165496 289 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Snord93-201ENSMUST00000175580 71 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm22450-201ENSMUST00000179641 107 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm25473-201ENSMUST00000180191 107 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm44256-201ENSMUST00000203304 335 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm7422-201ENSMUST00000220115 640 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm22704-201ENSMUST00000083027 137 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm26071-201ENSMUST00000083261 107 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm23454-201ENSMUST00000083332 133 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm23850-201ENSMUST00000083830 169 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Gm24521-201ENSMUST00000083958 107 ntBASIC2.71□□□□□ -1.98
Col28a1Q2UY11 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col28a1Q2UY11 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm22674-201ENSMUST00000104413 131 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm14894-201ENSMUST00000117170 270 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm11285-201ENSMUST00000118443 322 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm13210-201ENSMUST00000121483 273 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm15065-201ENSMUST00000121699 273 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm24594-201ENSMUST00000122502 99 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm23219-201ENSMUST00000158123 87 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm25051-201ENSMUST00000158602 249 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm17020-201ENSMUST00000172274 274 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm25024-201ENSMUST00000179667 104 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm27476-201ENSMUST00000183366 104 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm27465-201ENSMUST00000184290 91 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Mir6540-201ENSMUST00000184886 108 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm5329-201ENSMUST00000186898 463 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm37449-201ENSMUST00000193016 270 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm30341-201ENSMUST00000194363 289 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm18658-201ENSMUST00000195558 270 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm23517-201ENSMUST00000082830 192 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.7□□□□□ -1.98
Col28a1Q2UY11 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm22321-201ENSMUST00000157152 104 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm23640-201ENSMUST00000157860 104 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm17186-201ENSMUST00000171742 456 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm23002-201ENSMUST00000179221 107 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm23966-201ENSMUST00000179823 107 ntBASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col28a1Q2UY11 Gm27505-201ENSMUST00000185071 110 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms