Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45038-201ENSMUST00000207537 3838 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm14977-201ENSMUST00000121626 812 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm13424-201ENSMUST00000122301 354 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm23887-201ENSMUST00000122683 172 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm22989-201ENSMUST00000158313 86 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm2389-201ENSMUST00000160487 189 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col17a1Q07563 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col17a1Q07563 Gm26922-201ENSMUST00000082687 72 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 AF357341-201ENSMUST00000083088 75 ntBASIC4.09□□□□□ -1.75
Col17a1Q07563 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col17a1Q07563 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.09□□□□□ -1.76
Col17a1Q07563 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col17a1Q07563 Gm381-201ENSMUST00000117443 2037 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm14566-201ENSMUST00000118915 321 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm25150-201ENSMUST00000157121 60 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm24131-201ENSMUST00000158539 107 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm37007-201ENSMUST00000194234 319 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Igkv4-60-201ENSMUST00000200639 358 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.08□□□□□ -1.76
Col17a1Q07563 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm9795-201ENSMUST00000062156 693 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Gm25814-201ENSMUST00000082754 107 ntBASIC4.08□□□□□ -1.76
Col17a1Q07563 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Col17a1Q07563 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm12779-201ENSMUST00000121496 143 ntBASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm24085-201ENSMUST00000175172 116 ntBASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm26501-201ENSMUST00000178307 107 ntBASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm23571-201ENSMUST00000180073 127 ntBASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.07□□□□□ -1.76
Col17a1Q07563 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Col17a1Q07563 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col17a1Q07563 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Col17a1Q07563 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col17a1Q07563 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col17a1Q07563 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm2066-201ENSMUST00000118046 389 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm14591-201ENSMUST00000120407 518 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm26479-201ENSMUST00000122620 106 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm23474-201ENSMUST00000158884 75 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 AC158631.1-201ENSMUST00000219202 138 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm25930-201ENSMUST00000082785 107 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col17a1Q07563 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.06□□□□□ -1.76
Col17a1Q07563 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm11819-201ENSMUST00000122192 372 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm25836-201ENSMUST00000158918 123 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Mir7661-201ENSMUST00000197023 61 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC4.05□□□□□ -1.76
Col17a1Q07563 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Mir21a-201ENSMUST00000083521 92 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm43256-201ENSMUST00000199995 3091 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm45652-201ENSMUST00000210926 3831 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col17a1Q07563 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm13901-201ENSMUST00000137252 468 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm26149-201ENSMUST00000157432 108 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm25450-201ENSMUST00000179144 107 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm28344-201ENSMUST00000185704 279 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm44720-201ENSMUST00000206076 260 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm26458-201ENSMUST00000082832 128 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Gm24261-201ENSMUST00000083744 104 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Mir452-201ENSMUST00000093629 85 ntBASIC4.05□□□□□ -1.76
Col17a1Q07563 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col17a1Q07563 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm43540-201ENSMUST00000196320 3848 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col17a1Q07563 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm22003-201ENSMUST00000101885 107 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Mir147-201ENSMUST00000102354 79 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm22784-201ENSMUST00000104088 132 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm24671-201ENSMUST00000104159 158 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm24132-201ENSMUST00000104745 91 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm15846-201ENSMUST00000116022 320 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm22756-201ENSMUST00000180118 107 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm36954-201ENSMUST00000195362 363 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm30674-201ENSMUST00000214523 392 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm26054-201ENSMUST00000083037 107 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Mir200b-201ENSMUST00000083615 70 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm24492-201ENSMUST00000083798 107 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm10351-201ENSMUST00000087694 125 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Gm37895-201ENSMUST00000192448 4550 ntBASIC4.04□□□□□ -1.76
Col17a1Q07563 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 170.4 ms