Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC161758.2-201ENSMUST00000228513 218 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Mir489-201ENSMUST00000093599 107 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Col9a1Q05722 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col9a1Q05722 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col9a1Q05722 Gm12683-201ENSMUST00000117528 415 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Gm25105-201ENSMUST00000122477 130 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Mir1934-201ENSMUST00000158127 83 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Mir6916-201ENSMUST00000184514 63 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Gm43925-201ENSMUST00000203498 206 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Gm36776-201ENSMUST00000207006 203 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col9a1Q05722 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col9a1Q05722 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col9a1Q05722 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col9a1Q05722 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col9a1Q05722 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col9a1Q05722 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.26□□□□□ -1.73
Col9a1Q05722 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Mir547-201ENSMUST00000102051 78 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm14946-201ENSMUST00000119859 296 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm11414-201ENSMUST00000121795 263 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm22451-201ENSMUST00000122803 151 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm27392-201ENSMUST00000185041 101 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col9a1Q05722 Gm44964-201ENSMUST00000207011 273 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 AC124524.1-201ENSMUST00000225833 181 ntBASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col9a1Q05722 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col9a1Q05722 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm45558-201ENSMUST00000209384 1895 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col9a1Q05722 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm13588-201ENSMUST00000120026 135 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm15733-201ENSMUST00000132957 242 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm8034-201ENSMUST00000178853 132 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm20058-201ENSMUST00000186939 284 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Mir1291-201ENSMUST00000199842 117 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col9a1Q05722 Snora34-201ENSMUST00000083402 138 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Gm23850-201ENSMUST00000083830 169 ntBASIC4.24□□□□□ -1.73
Col9a1Q05722 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col9a1Q05722 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col9a1Q05722 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col9a1Q05722 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col9a1Q05722 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm24727-201ENSMUST00000158231 144 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm23215-201ENSMUST00000178153 121 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm28270-201ENSMUST00000188550 109 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm28328-201ENSMUST00000188869 109 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm37300-201ENSMUST00000193327 280 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Gm22354-201ENSMUST00000083919 70 ntBASIC4.23□□□□□ -1.73
Col9a1Q05722 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col9a1Q05722 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col9a1Q05722 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.22□□□□□ -1.73
Col9a1Q05722 Gm38071-201ENSMUST00000195792 3378 ntBASIC4.22□□□□□ -1.73
Col9a1Q05722 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col9a1Q05722 AC161250.2-201ENSMUST00000215114 3107 ntBASIC4.22□□□□□ -1.73
Col9a1Q05722 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 344.4 ms