Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22316-201ENSMUST00000158012 216 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm25373-201ENSMUST00000158156 115 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm23380-201ENSMUST00000158448 103 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm27445-201ENSMUST00000184484 72 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a1Q04857 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm5762-201ENSMUST00000119204 258 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm24930-201ENSMUST00000158315 83 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Mir3103-201ENSMUST00000175474 67 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm6003-201ENSMUST00000187903 463 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm45543-201ENSMUST00000209327 88 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm18617-201ENSMUST00000222311 259 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm25814-201ENSMUST00000082754 107 ntBASIC3.8□□□□□ -1.8
Col6a1Q04857 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a1Q04857 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a1Q04857 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a1Q04857 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a1Q04857 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm15497-201ENSMUST00000119137 551 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm25107-201ENSMUST00000122472 129 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm23257-201ENSMUST00000158322 132 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm43680-201ENSMUST00000199466 340 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm44966-201ENSMUST00000208096 157 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Gm10242-201ENSMUST00000090064 330 ntBASIC3.79□□□□□ -1.8
Col6a1Q04857 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a1Q04857 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Col6a1Q04857 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a1Q04857 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Col6a1Q04857 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a1Q04857 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Col6a1Q04857 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm14069-201ENSMUST00000120815 229 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm23044-201ENSMUST00000157891 100 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Snord92-201ENSMUST00000175548 85 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm28825-201ENSMUST00000186233 238 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm28650-201ENSMUST00000188413 411 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm42855-201ENSMUST00000197388 253 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Gm22249-201ENSMUST00000082485 136 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Snord14d-201ENSMUST00000083424 86 ntBASIC3.78□□□□□ -1.8
Col6a1Q04857 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Col6a1Q04857 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
Col6a1Q04857 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm22957-201ENSMUST00000122511 123 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm25269-201ENSMUST00000122601 104 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm22034-201ENSMUST00000157283 134 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm24053-201ENSMUST00000158620 105 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm22699-201ENSMUST00000175376 105 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm28828-201ENSMUST00000186601 696 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm28159-201ENSMUST00000190296 696 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Gm24762-201ENSMUST00000083689 104 ntBASIC3.77□□□□□ -1.81
Col6a1Q04857 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a1Q04857 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col6a1Q04857 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a1Q04857 Gm13797-201ENSMUST00000121792 120 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.76□□□□□ -1.81
Col6a1Q04857 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a1Q04857 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a1Q04857 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a1Q04857 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a1Q04857 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a1Q04857 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a1Q04857 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a1Q04857 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a1Q04857 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm15282-201ENSMUST00000117707 300 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm24959-201ENSMUST00000157924 146 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm24304-201ENSMUST00000177635 107 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm17067-202ENSMUST00000180131 123 ntBASIC3.75□□□□□ -1.81
Col6a1Q04857 Gm6947-201ENSMUST00000186254 78 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms