Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm14362-201ENSMUST00000121679 273 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm11358-201ENSMUST00000122310 373 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm15254-201ENSMUST00000149567 273 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm22082-201ENSMUST00000157587 161 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm25163-201ENSMUST00000158905 104 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm22800-201ENSMUST00000175627 94 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm24388-201ENSMUST00000177872 107 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Mir6399-201ENSMUST00000184050 84 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm28151-201ENSMUST00000189404 951 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm43680-201ENSMUST00000199466 340 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Nkx3-1P97436 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm26265-201ENSMUST00000083277 135 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm10360-201ENSMUST00000097219 272 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm22771-201ENSMUST00000104449 91 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm26301-201ENSMUST00000104813 95 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm22678-201ENSMUST00000116974 101 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm26029-201ENSMUST00000158659 132 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm7925-201ENSMUST00000166690 401 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm11392-201ENSMUST00000181419 710 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Mir8119-201ENSMUST00000183371 129 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Mir7063-201ENSMUST00000184158 91 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm28648-201ENSMUST00000190092 343 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm9402-201ENSMUST00000196849 388 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm42509-201ENSMUST00000197390 781 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.11□□□□□ -2.23
Nkx3-1P97436 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.11□□□□□ -2.23
Nkx3-1P97436 Gm11857-201ENSMUST00000119817 324 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm14215-201ENSMUST00000120578 221 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm12770-201ENSMUST00000121734 462 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm25559-201ENSMUST00000157182 74 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm24191-201ENSMUST00000157977 122 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm7953-201ENSMUST00000168278 469 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm23725-201ENSMUST00000177876 107 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm27624-201ENSMUST00000185047 177 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm18356-201ENSMUST00000185677 623 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm28740-201ENSMUST00000186142 215 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm28437-201ENSMUST00000190277 783 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.1□□□□□ -2.23
Nkx3-1P97436 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.1□□□□□ -2.23
Nkx3-1P97436 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.1□□□□□ -2.23
Nkx3-1P97436 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm24150-201ENSMUST00000082759 104 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Gm24805-201ENSMUST00000082931 104 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.1□□□□□ -2.23
Nkx3-1P97436 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Nkx3-1P97436 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.1□□□□□ -2.23
Nkx3-1P97436 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25274-201ENSMUST00000104296 135 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm12309-201ENSMUST00000119889 182 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm13720-201ENSMUST00000120741 196 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24596-201ENSMUST00000122504 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24438-201ENSMUST00000157893 115 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24584-201ENSMUST00000157972 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24837-201ENSMUST00000158683 81 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25976-201ENSMUST00000158695 130 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25211-201ENSMUST00000177553 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24540-201ENSMUST00000177627 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25256-201ENSMUST00000177746 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm22822-201ENSMUST00000177941 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Rnu6-201ENSMUST00000178023 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm23151-201ENSMUST00000178061 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25245-201ENSMUST00000178139 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24753-201ENSMUST00000178183 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25829-201ENSMUST00000178275 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm22092-201ENSMUST00000178290 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24486-201ENSMUST00000178420 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm23217-201ENSMUST00000178482 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm26245-201ENSMUST00000178491 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm23610-201ENSMUST00000178659 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm23092-201ENSMUST00000178688 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25709-201ENSMUST00000178844 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25547-201ENSMUST00000178877 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25312-201ENSMUST00000178972 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24722-201ENSMUST00000179017 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm22969-201ENSMUST00000179018 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25101-201ENSMUST00000179057 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm26378-201ENSMUST00000179093 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24873-201ENSMUST00000179101 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm23934-201ENSMUST00000179111 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm22623-201ENSMUST00000179244 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm25737-201ENSMUST00000179274 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm22618-201ENSMUST00000179376 107 ntBASIC1.09□□□□□ -2.23
Nkx3-1P97436 Gm24182-201ENSMUST00000179419 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms