Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm14670-201ENSMUST00000117327 337 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm23016-201ENSMUST00000158431 62 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Sox3P53784 Gm25314-201ENSMUST00000178810 79 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Mir6341-201ENSMUST00000183490 121 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Mir6950-201ENSMUST00000184438 73 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm29134-201ENSMUST00000186579 126 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm28337-201ENSMUST00000190425 666 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm37557-201ENSMUST00000191640 139 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm31123-201ENSMUST00000192094 666 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm37337-201ENSMUST00000192601 993 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm37449-201ENSMUST00000193016 270 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Sox3P53784 Gm18658-201ENSMUST00000195558 270 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.8□□□□□ -2.12
Sox3P53784 Gm45402-201ENSMUST00000211796 223 ntBASIC1.8□□□□□ -2.12
Sox3P53784 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.8□□□□□ -2.12
Sox3P53784 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.8□□□□□ -2.12
Sox3P53784 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Sox3P53784 Gm22062-201ENSMUST00000082563 107 ntBASIC1.8□□□□□ -2.12
Sox3P53784 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.8□□□□□ -2.12
Sox3P53784 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
Sox3P53784 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Sox3P53784 Gm24172-201ENSMUST00000104127 117 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm12255-201ENSMUST00000117184 284 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm15899-201ENSMUST00000128586 238 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm22037-201ENSMUST00000157280 296 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm23557-201ENSMUST00000157820 138 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm24409-201ENSMUST00000157881 152 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Snord11-201ENSMUST00000158468 84 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm25044-201ENSMUST00000158603 104 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Sox3P53784 Gm27544-201ENSMUST00000185069 155 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.79□□□□□ -2.12
Sox3P53784 Gm42672-201ENSMUST00000197821 352 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm45315-201ENSMUST00000209283 333 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm45386-201ENSMUST00000210194 218 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm2829-201ENSMUST00000213121 499 ntBASIC1.79□□□□□ -2.12
Sox3P53784 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.79□□□□□ -2.12
Sox3P53784 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.79□□□□□ -2.12
Sox3P53784 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.79□□□□□ -2.12
Sox3P53784 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.79□□□□□ -2.12
Sox3P53784 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Gm23246-201ENSMUST00000083371 67 ntBASIC1.79□□□□□ -2.12
Sox3P53784 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Sox3P53784 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Sox3P53784 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sox3P53784 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sox3P53784 Gm26082-201ENSMUST00000104070 127 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Gm14624-201ENSMUST00000117746 192 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Gm22727-201ENSMUST00000158090 116 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Gm25711-201ENSMUST00000158633 128 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Gm25020-201ENSMUST00000178071 107 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Sox3P53784 Gm27979-201ENSMUST00000185126 56 ntBASIC1.78□□□□□ -2.12
Sox3P53784 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.78□□□□□ -2.12
Sox3P53784 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.78□□□□□ -2.12
Sox3P53784 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Sox3P53784 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Sox3P53784 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Sox3P53784 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Sox3P53784 Gm24338-201ENSMUST00000104205 127 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.77□□□□□ -2.13
Sox3P53784 Gm24478-201ENSMUST00000157439 158 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm22654-201ENSMUST00000157874 105 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Mir3968-201ENSMUST00000175355 100 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm21737-201ENSMUST00000178112 664 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm21815-201ENSMUST00000178213 664 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm25933-201ENSMUST00000178943 108 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm20901-201ENSMUST00000180177 664 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm28925-201ENSMUST00000188586 168 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm28090-201ENSMUST00000189458 664 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm21647-201ENSMUST00000189755 664 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm43583-201ENSMUST00000199235 303 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm44564-201ENSMUST00000207985 180 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm45375-201ENSMUST00000210338 280 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm8125-201ENSMUST00000216602 738 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm46312-201ENSMUST00000220961 420 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Gm24623-201ENSMUST00000082616 194 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Mir200b-201ENSMUST00000083615 70 ntBASIC1.77□□□□□ -2.13
Sox3P53784 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.77□□□□□ -2.13
Sox3P53784 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Sox3P53784 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Sox3P53784 Gm25090-201ENSMUST00000104000 132 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm14748-201ENSMUST00000119819 411 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.76□□□□□ -2.13
Sox3P53784 Gm23589-201ENSMUST00000157660 105 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm24498-201ENSMUST00000158445 102 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm24837-201ENSMUST00000158683 81 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm25956-201ENSMUST00000175115 217 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm22800-201ENSMUST00000175627 94 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm27668-201ENSMUST00000184188 120 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm37054-201ENSMUST00000193481 543 ntBASIC1.76□□□□□ -2.13
Sox3P53784 Gm44337-201ENSMUST00000196553 114 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 258.4 ms