Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.65□□□□□ -1.82
Sox1P53783 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Sox1P53783 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Sox1P53783 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sox1P53783 Gm27396-201ENSMUST00000157708 58 ntBASIC3.65□□□□□ -1.83
Sox1P53783 Gm16546-201ENSMUST00000159442 355 ntBASIC3.65□□□□□ -1.83
Sox1P53783 Trbv18-201ENSMUST00000194256 294 ntBASIC3.65□□□□□ -1.83
Sox1P53783 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.65□□□□□ -1.83
Sox1P53783 Mir28a-201ENSMUST00000083560 86 ntBASIC3.65□□□□□ -1.83
Sox1P53783 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.65□□□□□ -1.83
Sox1P53783 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Sox1P53783 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Sox1P53783 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sox1P53783 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sox1P53783 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sox1P53783 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Gm22472-201ENSMUST00000104115 134 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Gm23791-201ENSMUST00000122553 293 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.64□□□□□ -1.83
Sox1P53783 Gm22322-201ENSMUST00000157151 111 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Gm26403-201ENSMUST00000158500 105 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sox1P53783 Gm24304-201ENSMUST00000177635 107 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Gm27869-201ENSMUST00000184327 122 ntBASIC3.64□□□□□ -1.83
Sox1P53783 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.64□□□□□ -1.83
Sox1P53783 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.64□□□□□ -1.83
Sox1P53783 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.64□□□□□ -1.83
Sox1P53783 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.64□□□□□ -1.83
Sox1P53783 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox1P53783 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.64□□□□□ -1.83
Sox1P53783 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Sox1P53783 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
Sox1P53783 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox1P53783 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox1P53783 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox1P53783 Gm24892-201ENSMUST00000122747 104 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm22349-201ENSMUST00000157864 107 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm24056-201ENSMUST00000158617 146 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox1P53783 Mir3965-201ENSMUST00000175570 69 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Mir21b-201ENSMUST00000184317 108 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox1P53783 Gm26265-202ENSMUST00000196326 133 ntBASIC3.63□□□□□ -1.83
Sox1P53783 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm30534-201ENSMUST00000217928 207 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Gm18502-201ENSMUST00000218679 199 ntBASIC3.63□□□□□ -1.83
Sox1P53783 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Sox1P53783 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Sox1P53783 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sox1P53783 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sox1P53783 Gm22148-201ENSMUST00000104445 107 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sox1P53783 Gm26249-201ENSMUST00000116708 118 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm22051-201ENSMUST00000117002 127 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm12025-201ENSMUST00000117768 144 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm24440-201ENSMUST00000157236 63 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm26482-201ENSMUST00000158015 62 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm25267-201ENSMUST00000158522 63 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm22139-201ENSMUST00000158747 105 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm7592-201ENSMUST00000160674 627 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm4468-201ENSMUST00000170206 294 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm24512-201ENSMUST00000174963 65 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Mir5118-201ENSMUST00000175551 67 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm22910-201ENSMUST00000178568 132 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm28500-201ENSMUST00000190286 151 ntBASIC3.62□□□□□ -1.83
Sox1P53783 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.62□□□□□ -1.83
Sox1P53783 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.62□□□□□ -1.83
Sox1P53783 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.62□□□□□ -1.83
Sox1P53783 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Gm22248-201ENSMUST00000082482 150 ntBASIC3.62□□□□□ -1.83
Sox1P53783 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.62□□□□□ -1.83
Sox1P53783 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox1P53783 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sox1P53783 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Sox1P53783 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox1P53783 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox1P53783 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox1P53783 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Snord14c-201ENSMUST00000101927 86 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Gm13922-201ENSMUST00000119505 156 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Gm37698-201ENSMUST00000192605 463 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Gm42855-201ENSMUST00000197388 253 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Gm42988-201ENSMUST00000198116 225 ntBASIC3.61□□□□□ -1.83
Sox1P53783 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.61□□□□□ -1.83
Sox1P53783 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox1P53783 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sox1P53783 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox1P53783 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sox1P53783 Gm24283-201ENSMUST00000104233 107 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm23202-201ENSMUST00000104376 129 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Mir1198-201ENSMUST00000116995 121 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm8260-201ENSMUST00000119230 353 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.6□□□□□ -1.83
Sox1P53783 Gm23585-201ENSMUST00000157656 102 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm24601-201ENSMUST00000157970 143 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm22521-201ENSMUST00000158272 134 ntBASIC3.6□□□□□ -1.83
Sox1P53783 Gm24358-201ENSMUST00000158424 288 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 305.6 ms