Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm15215-201ENSMUST00000117773 489 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Traf1P39428 Gm25460-201ENSMUST00000157954 127 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Mir6901-201ENSMUST00000185062 62 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Gm44320-201ENSMUST00000199276 86 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.3□□□□□ -2.04
Traf1P39428 Gm20102-201ENSMUST00000222445 220 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Traf1P39428 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Traf1P39428 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Traf1P39428 Gm25207-201ENSMUST00000093745 107 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Gm14269-201ENSMUST00000120455 306 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm25059-201ENSMUST00000157367 117 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm24419-201ENSMUST00000157875 332 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm24177-201ENSMUST00000158927 131 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Mir7017-201ENSMUST00000184894 62 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Mir7021-201ENSMUST00000197026 63 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm45150-201ENSMUST00000206051 467 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.29□□□□□ -2.04
Traf1P39428 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.29□□□□□ -2.04
Traf1P39428 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.29□□□□□ -2.04
Traf1P39428 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm26922-201ENSMUST00000082687 72 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm25896-201ENSMUST00000083713 136 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm22723-201ENSMUST00000083820 129 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Traf1P39428 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.29□□□□□ -2.04
Traf1P39428 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Mir758-201ENSMUST00000103260 81 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm23011-201ENSMUST00000104148 132 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm24984-201ENSMUST00000104454 133 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm7164-201ENSMUST00000117503 450 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm25115-201ENSMUST00000157187 140 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm23048-201ENSMUST00000157237 129 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm24480-201ENSMUST00000157442 103 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Traf1P39428 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.28□□□□□ -2.04
Traf1P39428 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.28□□□□□ -2.04
Traf1P39428 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.28□□□□□ -2.04
Traf1P39428 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Traf1P39428 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Traf1P39428 Mir701-201ENSMUST00000102208 109 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Snord98-201ENSMUST00000116819 65 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm24770-201ENSMUST00000158505 92 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm22308-201ENSMUST00000177609 107 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm9830-201ENSMUST00000178509 357 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Mir7026-201ENSMUST00000184384 67 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm37579-201ENSMUST00000194291 142 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm45654-201ENSMUST00000210980 123 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.27□□□□□ -2.05
Traf1P39428 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.27□□□□□ -2.05
Traf1P39428 Gm45815-201ENSMUST00000220241 146 ntBASIC2.27□□□□□ -2.05
Traf1P39428 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.27□□□□□ -2.05
Traf1P39428 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm22997-201ENSMUST00000082845 107 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm24037-201ENSMUST00000082871 180 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm26175-201ENSMUST00000083794 131 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Traf1P39428 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.27□□□□□ -2.05
Traf1P39428 Gm15067-201ENSMUST00000119534 156 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm23169-201ENSMUST00000157157 112 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm24498-201ENSMUST00000158445 102 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm21885-201ENSMUST00000178891 327 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm27511-201ENSMUST00000183502 127 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm27722-201ENSMUST00000183908 76 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm44465-201ENSMUST00000199536 114 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm25589-201ENSMUST00000082502 166 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Gm24151-201ENSMUST00000082758 141 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Traf1P39428 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.26□□□□□ -2.05
Traf1P39428 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Traf1P39428 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Traf1P39428 Gm24282-201ENSMUST00000104232 66 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm23109-201ENSMUST00000116867 126 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm24598-201ENSMUST00000122510 74 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm22073-201ENSMUST00000122668 189 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.25□□□□□ -2.05
Traf1P39428 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Traf1P39428 U6.1-201ENSMUST00000157443 101 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Mir669n-201ENSMUST00000158636 54 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm20613-201ENSMUST00000175828 345 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
Traf1P39428 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Traf1P39428 Gm37054-201ENSMUST00000193481 543 ntBASIC2.25□□□□□ -2.05
Traf1P39428 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.25□□□□□ -2.05
Traf1P39428 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.25□□□□□ -2.05
Traf1P39428 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Traf1P39428 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Traf1P39428 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Traf1P39428 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Traf1P39428 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.24□□□□□ -2.05
Traf1P39428 Gm23983-201ENSMUST00000157142 114 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm22099-201ENSMUST00000157925 123 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm25836-201ENSMUST00000158918 123 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 365.5 ms