Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usp4P35123 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.31□□□□□ -1.88
Usp4P35123 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp4P35123 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Usp4P35123 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.31□□□□□ -1.88
Usp4P35123 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Usp4P35123 Gm25914-201ENSMUST00000157618 153 ntBASIC3.31□□□□□ -1.88
Usp4P35123 Gm22532-201ENSMUST00000158822 140 ntBASIC3.31□□□□□ -1.88
Usp4P35123 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Usp4P35123 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.31□□□□□ -1.88
Usp4P35123 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.31□□□□□ -1.88
Usp4P35123 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp4P35123 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp4P35123 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp4P35123 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Usp4P35123 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Usp4P35123 Gm24582-201ENSMUST00000103967 103 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm24118-201ENSMUST00000103972 126 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm11460-201ENSMUST00000118200 361 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm24936-201ENSMUST00000122598 247 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm24627-201ENSMUST00000122764 138 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.3□□□□□ -1.88
Usp4P35123 Gm26100-201ENSMUST00000157245 127 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm22883-201ENSMUST00000157376 106 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm23584-201ENSMUST00000157655 129 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Usp4P35123 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm27374-201ENSMUST00000183660 81 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm27761-201ENSMUST00000184091 131 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Gm43239-201ENSMUST00000200131 201 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Usp4P35123 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp4P35123 Gm22970-201ENSMUST00000083304 186 ntBASIC3.3□□□□□ -1.88
Usp4P35123 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp4P35123 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp4P35123 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp4P35123 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usp4P35123 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Snord14c-201ENSMUST00000101927 86 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Usp4P35123 Gm11598-201ENSMUST00000119257 357 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm22026-201ENSMUST00000122735 281 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm24892-201ENSMUST00000122747 104 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm24001-201ENSMUST00000158463 85 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usp4P35123 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.29□□□□□ -1.88
Usp4P35123 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.29□□□□□ -1.88
Usp4P35123 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.29□□□□□ -1.88
Usp4P35123 Gm46233-201ENSMUST00000217831 449 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm22507-201ENSMUST00000082773 160 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Gm23727-201ENSMUST00000083352 164 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Mir146-201ENSMUST00000083667 65 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp4P35123 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.29□□□□□ -1.88
Usp4P35123 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Usp4P35123 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usp4P35123 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usp4P35123 Gm25308-201ENSMUST00000104171 158 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm11253-201ENSMUST00000118486 201 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm26020-201ENSMUST00000122729 183 ntBASIC3.28□□□□□ -1.88
Usp4P35123 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usp4P35123 Gm22097-201ENSMUST00000157929 278 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm22961-201ENSMUST00000157964 106 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm25490-201ENSMUST00000158734 130 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.28□□□□□ -1.88
Usp4P35123 Gm22192-201ENSMUST00000175128 85 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Mir5136-201ENSMUST00000175573 76 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp4P35123 Gm26200-201ENSMUST00000180273 79 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm27585-201ENSMUST00000183717 199 ntBASIC3.28□□□□□ -1.88
Usp4P35123 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.28□□□□□ -1.88
Usp4P35123 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Snord82-201ENSMUST00000082889 70 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Gm25632-201ENSMUST00000083112 85 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usp4P35123 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.28□□□□□ -1.88
Usp4P35123 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usp4P35123 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Usp4P35123 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp4P35123 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usp4P35123 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Usp4P35123 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Usp4P35123 Mir466p-201ENSMUST00000103925 89 ntBASIC3.27□□□□□ -1.89
Usp4P35123 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.27□□□□□ -1.89
Usp4P35123 Mir8096-201ENSMUST00000184526 127 ntBASIC3.27□□□□□ -1.89
Usp4P35123 Gm43220-201ENSMUST00000199299 282 ntBASIC3.27□□□□□ -1.89
Usp4P35123 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.27□□□□□ -1.89
Usp4P35123 Gm18015-201ENSMUST00000214879 316 ntBASIC3.27□□□□□ -1.89
Usp4P35123 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.27□□□□□ -1.89
Usp4P35123 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.27□□□□□ -1.89
Usp4P35123 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.27□□□□□ -1.89
Usp4P35123 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.27□□□□□ -1.89
Usp4P35123 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.27□□□□□ -1.89
Usp4P35123 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.27□□□□□ -1.89
Usp4P35123 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
Usp4P35123 Gm23747-201ENSMUST00000104228 131 ntBASIC3.26□□□□□ -1.89
Usp4P35123 Gm26249-201ENSMUST00000116708 118 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms