Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm22978-201ENSMUST00000082607 160 ntBASIC2.12□□□□□ -2.07
Nckap1P28660 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.12□□□□□ -2.07
Nckap1P28660 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Nckap1P28660 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.12□□□□□ -2.07
Nckap1P28660 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.12□□□□□ -2.07
Nckap1P28660 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Nckap1P28660 Mdga2-203ENSMUST00000113942 423 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm14774-201ENSMUST00000117857 536 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm25827-201ENSMUST00000157089 107 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm23324-201ENSMUST00000157421 131 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm22435-201ENSMUST00000158552 128 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Nckap1P28660 Gm7953-201ENSMUST00000168278 469 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.11□□□□□ -2.07
Nckap1P28660 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
Nckap1P28660 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Nckap1P28660 Gm22364-201ENSMUST00000083097 98 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm26265-201ENSMUST00000083277 135 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm23246-201ENSMUST00000083371 67 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm22365-201ENSMUST00000093750 117 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Nckap1P28660 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.11□□□□□ -2.07
Nckap1P28660 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Nckap1P28660 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nckap1P28660 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Nckap1P28660 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nckap1P28660 Gm13439-201ENSMUST00000117541 409 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm14574-201ENSMUST00000120644 279 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Trav20-201ENSMUST00000142754 347 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.1□□□□□ -2.07
Nckap1P28660 Gm27926-201ENSMUST00000157180 66 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm23435-201ENSMUST00000157183 156 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm25625-201ENSMUST00000157221 96 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm24504-201ENSMUST00000157679 100 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm24499-201ENSMUST00000158446 104 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm24304-201ENSMUST00000177635 107 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm25457-201ENSMUST00000179509 107 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm27410-201ENSMUST00000183851 115 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm28627-201ENSMUST00000186141 453 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Gm43624-201ENSMUST00000197368 180 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.1□□□□□ -2.07
Nckap1P28660 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Nckap1P28660 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Nckap1P28660 Gm42606-201ENSMUST00000114209 239 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm6956-201ENSMUST00000134724 546 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm3027-201ENSMUST00000167579 451 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Nckap1P28660 Mir7017-201ENSMUST00000184894 62 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm43512-201ENSMUST00000198495 176 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.09□□□□□ -2.07
Nckap1P28660 Gm40810-201ENSMUST00000219149 253 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm23404-201ENSMUST00000082543 97 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm23462-201ENSMUST00000083264 104 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Gm25896-201ENSMUST00000083713 136 ntBASIC2.09□□□□□ -2.07
Nckap1P28660 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Nckap1P28660 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Nckap1P28660 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm23950-201ENSMUST00000104026 129 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm23011-201ENSMUST00000104148 132 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm22678-201ENSMUST00000116974 101 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm14215-201ENSMUST00000120578 221 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm13396-201ENSMUST00000120617 271 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm24005-201ENSMUST00000158459 296 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm24388-201ENSMUST00000177872 107 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm27991-201ENSMUST00000184804 137 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm29397-201ENSMUST00000185205 333 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm29604-201ENSMUST00000187176 163 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Gm43238-201ENSMUST00000196463 359 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.08□□□□□ -2.08
Nckap1P28660 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nckap1P28660 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Nckap1P28660 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Nckap1P28660 Gm24049-201ENSMUST00000102409 100 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm25509-201ENSMUST00000116985 106 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm12646-201ENSMUST00000119144 238 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm14748-201ENSMUST00000119819 411 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.07□□□□□ -2.08
Nckap1P28660 Gm22099-201ENSMUST00000157925 123 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm24858-201ENSMUST00000158058 323 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm21978-201ENSMUST00000179696 377 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Mir6346-201ENSMUST00000183982 81 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Nckap1P28660 Mir7217-201ENSMUST00000200304 62 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm43884-201ENSMUST00000204251 559 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm18991-201ENSMUST00000209225 746 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.07□□□□□ -2.08
Nckap1P28660 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nckap1P28660 Gm25135-201ENSMUST00000082648 143 ntBASIC2.07□□□□□ -2.08
Nckap1P28660 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Nckap1P28660 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Nckap1P28660 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms