Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm20613-201ENSMUST00000175828 345 ntBASIC1.57□□□□□ -2.16
P20040 Gm21737-201ENSMUST00000178112 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm21729-201ENSMUST00000180058 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm21853-201ENSMUST00000180071 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm20901-201ENSMUST00000180177 664 ntBASIC1.57□□□□□ -2.16
P20040 Mir6341-201ENSMUST00000183490 121 ntBASIC1.57□□□□□ -2.16
P20040 Gm27313-201ENSMUST00000183500 142 ntBASIC1.57□□□□□ -2.16
P20040 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
P20040 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
P20040 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.57□□□□□ -2.16
P20040 Gm18357-201ENSMUST00000188184 580 ntBASIC1.57□□□□□ -2.16
P20040 Gm29495-201ENSMUST00000189319 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm28090-201ENSMUST00000189458 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm21647-201ENSMUST00000189755 664 ntBASIC1.57□□□□□ -2.16
P20040 Gm18775-201ENSMUST00000190763 586 ntBASIC1.57□□□□□ -2.16
P20040 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.57□□□□□ -2.16
P20040 Gm42960-201ENSMUST00000202160 241 ntBASIC1.57□□□□□ -2.16
P20040 Gm45315-201ENSMUST00000209283 333 ntBASIC1.57□□□□□ -2.16
P20040 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
P20040 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.57□□□□□ -2.16
P20040 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.57□□□□□ -2.16
P20040 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
P20040 Gm24623-201ENSMUST00000082616 194 ntBASIC1.57□□□□□ -2.16
P20040 Gm22299-201ENSMUST00000082663 136 ntBASIC1.57□□□□□ -2.16
P20040 Gm25651-201ENSMUST00000083782 119 ntBASIC1.57□□□□□ -2.16
P20040 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
P20040 Gm24282-201ENSMUST00000104232 66 ntBASIC1.56□□□□□ -2.16
P20040 Gm11891-201ENSMUST00000121241 619 ntBASIC1.56□□□□□ -2.16
P20040 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.56□□□□□ -2.16
P20040 Gm23172-201ENSMUST00000157160 124 ntBASIC1.56□□□□□ -2.16
P20040 U6.1-201ENSMUST00000157443 101 ntBASIC1.56□□□□□ -2.16
P20040 Gm23557-201ENSMUST00000157820 138 ntBASIC1.56□□□□□ -2.16
P20040 Gm24409-201ENSMUST00000157881 152 ntBASIC1.56□□□□□ -2.16
P20040 Gm9830-201ENSMUST00000178509 357 ntBASIC1.56□□□□□ -2.16
P20040 Mir7026-201ENSMUST00000184384 67 ntBASIC1.56□□□□□ -2.16
P20040 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.56□□□□□ -2.16
P20040 Mir3961-201ENSMUST00000198795 59 ntBASIC1.56□□□□□ -2.16
P20040 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.56□□□□□ -2.16
P20040 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
P20040 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.56□□□□□ -2.16
P20040 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
P20040 Gm26922-201ENSMUST00000082687 72 ntBASIC1.56□□□□□ -2.16
P20040 Gm25813-201ENSMUST00000082748 191 ntBASIC1.56□□□□□ -2.16
P20040 Gm22997-201ENSMUST00000082845 107 ntBASIC1.56□□□□□ -2.16
P20040 Gm22723-201ENSMUST00000083820 129 ntBASIC1.56□□□□□ -2.16
P20040 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
P20040 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
P20040 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
P20040 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.55□□□□□ -2.16
P20040 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.55□□□□□ -2.16
P20040 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.55□□□□□ -2.16
P20040 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.55□□□□□ -2.16
P20040 Gm24577-201ENSMUST00000158580 63 ntBASIC1.55□□□□□ -2.16
P20040 Gm25836-201ENSMUST00000158918 123 ntBASIC1.55□□□□□ -2.16
P20040 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
P20040 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.55□□□□□ -2.16
P20040 Gm27511-201ENSMUST00000183502 127 ntBASIC1.55□□□□□ -2.16
P20040 Gm28343-201ENSMUST00000185386 112 ntBASIC1.55□□□□□ -2.16
P20040 Gm44337-201ENSMUST00000196553 114 ntBASIC1.55□□□□□ -2.16
P20040 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.55□□□□□ -2.16
P20040 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
P20040 Gm45654-201ENSMUST00000210980 123 ntBASIC1.55□□□□□ -2.16
P20040 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.55□□□□□ -2.16
P20040 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.55□□□□□ -2.16
P20040 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.55□□□□□ -2.16
P20040 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.55□□□□□ -2.16
P20040 Gm25896-201ENSMUST00000083713 136 ntBASIC1.55□□□□□ -2.16
P20040 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
P20040 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
P20040 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
P20040 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.55□□□□□ -2.16
P20040 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
P20040 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
P20040 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
P20040 Gm22073-201ENSMUST00000122668 189 ntBASIC1.54□□□□□ -2.16
P20040 Gm22217-201ENSMUST00000157556 313 ntBASIC1.54□□□□□ -2.16
P20040 Gm24393-201ENSMUST00000158135 97 ntBASIC1.54□□□□□ -2.16
P20040 Gm22768-201ENSMUST00000158366 153 ntBASIC1.54□□□□□ -2.16
P20040 Gm23059-201ENSMUST00000158978 107 ntBASIC1.54□□□□□ -2.16
P20040 Snord87-201ENSMUST00000175437 87 ntBASIC1.54□□□□□ -2.16
P20040 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.54□□□□□ -2.16
P20040 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.54□□□□□ -2.16
P20040 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.54□□□□□ -2.16
P20040 Gm37579-201ENSMUST00000194291 142 ntBASIC1.54□□□□□ -2.16
P20040 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.54□□□□□ -2.16
P20040 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.54□□□□□ -2.16
P20040 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.54□□□□□ -2.16
P20040 Gm26066-201ENSMUST00000083385 109 ntBASIC1.54□□□□□ -2.16
P20040 Mir429-201ENSMUST00000083493 83 ntBASIC1.54□□□□□ -2.16
P20040 Gm22713-201ENSMUST00000116895 130 ntBASIC1.53□□□□□ -2.16
P20040 Gm14392-201ENSMUST00000120332 401 ntBASIC1.53□□□□□ -2.16
P20040 Gm14413-201ENSMUST00000122158 408 ntBASIC1.53□□□□□ -2.16
P20040 Gm23048-201ENSMUST00000157237 129 ntBASIC1.53□□□□□ -2.16
P20040 Gm22316-201ENSMUST00000158012 216 ntBASIC1.53□□□□□ -2.16
P20040 Gm23858-201ENSMUST00000158384 106 ntBASIC1.53□□□□□ -2.16
P20040 Gm22308-201ENSMUST00000177609 107 ntBASIC1.53□□□□□ -2.16
P20040 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
P20040 Mir6352-201ENSMUST00000184495 116 ntBASIC1.53□□□□□ -2.16
P20040 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.53□□□□□ -2.16
P20040 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms