Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
Sdc1P18828 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
Sdc1P18828 Gm34073-201ENSMUST00000195736 212 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Gm44429-201ENSMUST00000203542 186 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Gm45907-201ENSMUST00000213023 193 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.34□□□□□ -2.19
Sdc1P18828 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Gm22972-201ENSMUST00000083297 131 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Sdc1P18828 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Sdc1P18828 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.33□□□□□ -2.2
Sdc1P18828 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.33□□□□□ -2.2
Sdc1P18828 Gm22834-201ENSMUST00000102021 79 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm25094-201ENSMUST00000103992 131 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm22771-201ENSMUST00000104449 91 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm26249-201ENSMUST00000116708 118 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm22193-201ENSMUST00000116868 76 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm11606-201ENSMUST00000120706 617 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm6956-201ENSMUST00000134724 546 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm24358-201ENSMUST00000158424 288 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm27399-201ENSMUST00000184250 78 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Mir6419-201ENSMUST00000184784 113 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Mir7678-201ENSMUST00000185076 71 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.33□□□□□ -2.2
Sdc1P18828 Gm29603-201ENSMUST00000186792 334 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm37081-201ENSMUST00000192034 196 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.33□□□□□ -2.2
Sdc1P18828 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Sdc1P18828 Gm12956-201ENSMUST00000122184 414 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm24895-201ENSMUST00000122742 74 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm22221-201ENSMUST00000157362 103 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm23557-201ENSMUST00000157820 138 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm22963-201ENSMUST00000157960 91 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm24174-201ENSMUST00000158933 111 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Mir3092-201ENSMUST00000174954 96 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm22308-201ENSMUST00000177609 107 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm25936-201ENSMUST00000179952 114 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm11392-201ENSMUST00000181419 710 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm27957-201ENSMUST00000184054 127 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm27517-201ENSMUST00000184347 236 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.32□□□□□ -2.2
Sdc1P18828 Gm18185-201ENSMUST00000186725 667 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.32□□□□□ -2.2
Sdc1P18828 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.32□□□□□ -2.2
Sdc1P18828 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm44477-201ENSMUST00000199661 110 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm45315-201ENSMUST00000209283 333 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Sdc1P18828 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Gm26108-201ENSMUST00000083973 191 ntBASIC1.32□□□□□ -2.2
Sdc1P18828 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Sdc1P18828 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Sdc1P18828 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Sdc1P18828 Mir374b-201ENSMUST00000102314 95 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Sdc1P18828 Gm14943-201ENSMUST00000118056 546 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm23854-201ENSMUST00000158378 108 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm24677-201ENSMUST00000158755 150 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm16038-201ENSMUST00000159317 193 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Sdc1P18828 Gm22263-201ENSMUST00000180060 104 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.31□□□□□ -2.2
Sdc1P18828 Gm29005-201ENSMUST00000186773 320 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm29013-201ENSMUST00000187431 237 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm44844-201ENSMUST00000207242 336 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Sdc1P18828 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.31□□□□□ -2.2
Sdc1P18828 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm23015-201ENSMUST00000104145 128 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm12871-201ENSMUST00000118758 438 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm26150-201ENSMUST00000157426 151 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm26405-201ENSMUST00000158495 100 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm22666-201ENSMUST00000158717 164 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Sdc1P18828 Gm29397-201ENSMUST00000185205 333 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm37533-201ENSMUST00000193848 545 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Gm7495-201ENSMUST00000215099 426 ntBASIC1.3□□□□□ -2.2
Sdc1P18828 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms