Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22733-201ENSMUST00000158094 91 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cdx1P18111 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.27□□□□□ -2.21
Cdx1P18111 Gm35212-201ENSMUST00000196672 606 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Gm43035-201ENSMUST00000197626 517 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Gm46312-201ENSMUST00000220961 420 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cdx1P18111 Gm23453-201ENSMUST00000083326 106 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Mir148b-201ENSMUST00000083626 97 ntBASIC1.27□□□□□ -2.21
Cdx1P18111 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cdx1P18111 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cdx1P18111 Gm26080-201ENSMUST00000104069 131 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Cdx1P18111 Gm22665-201ENSMUST00000158720 275 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm23967-201ENSMUST00000175062 78 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm23725-201ENSMUST00000177876 107 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm29613-201ENSMUST00000185846 313 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm29544-201ENSMUST00000188860 313 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm28437-201ENSMUST00000190277 783 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm28808-201ENSMUST00000190978 313 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm42570-201ENSMUST00000195937 292 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cdx1P18111 Gm22972-201ENSMUST00000083297 131 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Snord38a-201ENSMUST00000083746 71 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Mir463-201ENSMUST00000093570 75 ntBASIC1.26□□□□□ -2.21
Cdx1P18111 Gm26384-201ENSMUST00000102183 110 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cdx1P18111 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm23656-201ENSMUST00000122626 112 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm24895-201ENSMUST00000122742 74 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.25□□□□□ -2.21
Cdx1P18111 Gm25914-201ENSMUST00000157618 153 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm23144-201ENSMUST00000180226 107 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm27490-201ENSMUST00000184754 128 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm38333-201ENSMUST00000193608 604 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm45116-201ENSMUST00000207392 275 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Snord118-201ENSMUST00000082965 135 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Gm24406-201ENSMUST00000083026 128 ntBASIC1.25□□□□□ -2.21
Cdx1P18111 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cdx1P18111 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cdx1P18111 Gm14882-201ENSMUST00000117216 218 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm13714-201ENSMUST00000117313 221 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm11857-201ENSMUST00000119817 324 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm25279-201ENSMUST00000122608 133 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm22944-201ENSMUST00000158662 133 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm24174-201ENSMUST00000158933 111 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm17113-201ENSMUST00000170118 171 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm18417-201ENSMUST00000176564 648 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm22263-201ENSMUST00000180060 104 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm43723-201ENSMUST00000196886 189 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm23093-201ENSMUST00000083450 102 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.24□□□□□ -2.21
Cdx1P18111 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm26396-201ENSMUST00000104093 132 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm24338-201ENSMUST00000104205 127 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm25109-201ENSMUST00000122474 114 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm23000-201ENSMUST00000157083 139 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm26150-201ENSMUST00000157426 151 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Rnu7-201ENSMUST00000158458 62 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm24348-201ENSMUST00000158710 130 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Traj60-201ENSMUST00000167781 54 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.23□□□□□ -2.21
Cdx1P18111 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Mir691-201ENSMUST00000199719 78 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm43406-201ENSMUST00000200356 334 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm44135-201ENSMUST00000205221 368 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm7495-201ENSMUST00000215099 426 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Gm19441-201ENSMUST00000221545 330 ntBASIC1.23□□□□□ -2.21
Cdx1P18111 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Cdx1P18111 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Cdx1P18111 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Cdx1P18111 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Cdx1P18111 Gm12512-201ENSMUST00000119620 217 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm22663-201ENSMUST00000158721 102 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Cdx1P18111 Gm27326-201ENSMUST00000183504 95 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm27493-201ENSMUST00000184128 78 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm28794-201ENSMUST00000185276 136 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm38280-201ENSMUST00000192610 158 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm34139-201ENSMUST00000196166 294 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm43245-201ENSMUST00000197603 468 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.22□□□□□ -2.21
Cdx1P18111 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.22□□□□□ -2.21
Cdx1P18111 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Cdx1P18111 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm24268-201ENSMUST00000082990 110 ntBASIC1.22□□□□□ -2.21
Cdx1P18111 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms