Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.52□□□□□ -2.33
Col1a1P11087 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Col1a1P11087 Gm12889-201ENSMUST00000118684 241 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm24839-201ENSMUST00000122602 107 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm22233-201ENSMUST00000157464 114 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm25914-201ENSMUST00000157618 153 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm25868-201ENSMUST00000158253 114 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm23208-201ENSMUST00000158666 127 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Mir466m-201ENSMUST00000175052 84 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.51□□□□□ -2.33
Col1a1P11087 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm44465-201ENSMUST00000199536 114 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.51□□□□□ -2.33
Col1a1P11087 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm23741-201ENSMUST00000097237 171 ntBASIC0.51□□□□□ -2.33
Col1a1P11087 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm22759-201ENSMUST00000102276 96 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm13356-201ENSMUST00000121678 335 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.5□□□□□ -2.33
Col1a1P11087 Gm25718-201ENSMUST00000158632 118 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm24221-201ENSMUST00000158833 313 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm23090-201ENSMUST00000177331 78 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm18667-201ENSMUST00000186523 484 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm38323-201ENSMUST00000192450 210 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm9236-201ENSMUST00000196892 587 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm42925-201ENSMUST00000197359 285 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm44961-201ENSMUST00000207450 196 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm45688-201ENSMUST00000210002 101 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm2628-201ENSMUST00000218019 426 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm40810-201ENSMUST00000219149 253 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm23645-201ENSMUST00000083228 108 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm23969-201ENSMUST00000083324 74 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm25128-201ENSMUST00000083339 76 ntBASIC0.5□□□□□ -2.33
Col1a1P11087 Gm25110-201ENSMUST00000116684 121 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm25775-201ENSMUST00000116716 121 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm24795-201ENSMUST00000116737 121 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm25171-201ENSMUST00000116926 121 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm11219-201ENSMUST00000118565 358 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm25108-201ENSMUST00000122473 78 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm24366-201ENSMUST00000175383 86 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm24388-201ENSMUST00000177872 107 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Col1a1P11087 Gm27715-201ENSMUST00000184714 260 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm29037-201ENSMUST00000189092 313 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC0.49□□□□□ -2.33
Col1a1P11087 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Gm3867-201ENSMUST00000086108 279 ntBASIC0.49□□□□□ -2.33
Col1a1P11087 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Col1a1P11087 Gm26074-201ENSMUST00000104063 129 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm15167-201ENSMUST00000121997 187 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm27342-201ENSMUST00000183530 109 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.48□□□□□ -2.33
Col1a1P11087 Gm37399-201ENSMUST00000195224 416 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm42976-201ENSMUST00000200313 222 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm19709-201ENSMUST00000215403 482 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm21089-201ENSMUST00000215843 325 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm18252-203ENSMUST00000215855 757 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm24494-201ENSMUST00000083804 81 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Col1a1P11087 Gm22785-201ENSMUST00000104087 132 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm14884-201ENSMUST00000120456 196 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.48□□□□□ -2.33
Col1a1P11087 Gm27660-201ENSMUST00000184028 208 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm37361-201ENSMUST00000194345 132 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col1a1P11087 Gm45439-201ENSMUST00000211723 359 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm26224-201ENSMUST00000082506 80 ntBASIC0.48□□□□□ -2.33
Col1a1P11087 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm14359-201ENSMUST00000118883 424 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.47□□□□□ -2.33
Col1a1P11087 Gm14972-201ENSMUST00000121780 364 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm23656-201ENSMUST00000122626 112 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm15274-201ENSMUST00000131442 291 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm21979-201ENSMUST00000139887 291 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm9498-201ENSMUST00000140849 291 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm14368-201ENSMUST00000145305 415 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm15259-201ENSMUST00000151262 291 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm15279-201ENSMUST00000155593 288 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm17377-201ENSMUST00000165184 207 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm8114-201ENSMUST00000172225 484 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Col1a1P11087 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.47□□□□□ -2.33
Col1a1P11087 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.47□□□□□ -2.33
Col1a1P11087 Gm46103-201ENSMUST00000217614 341 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm23454-201ENSMUST00000083332 133 ntBASIC0.47□□□□□ -2.33
Col1a1P11087 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.47□□□□□ -2.33
Col1a1P11087 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Col1a1P11087 Gm12449-201ENSMUST00000117572 234 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms