Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm23186-201ENSMUST00000180078 107 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Cldn1O88551 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.74□□□□□ -2.13
Cldn1O88551 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cldn1O88551 Gm29107-201ENSMUST00000190910 347 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm28211-201ENSMUST00000190920 315 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm43865-201ENSMUST00000204721 127 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm44794-201ENSMUST00000206550 411 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cldn1O88551 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cldn1O88551 Gm22683-201ENSMUST00000082854 137 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm23246-201ENSMUST00000083371 67 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cldn1O88551 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.74□□□□□ -2.13
Cldn1O88551 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Cldn1O88551 Mir301b-201ENSMUST00000102333 97 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm24172-201ENSMUST00000104127 117 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cldn1O88551 Gm15010-201ENSMUST00000117153 407 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm13378-201ENSMUST00000117483 336 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm23331-201ENSMUST00000157423 108 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm26345-201ENSMUST00000157534 120 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm25384-201ENSMUST00000157807 105 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Cldn1O88551 Gm23191-201ENSMUST00000179147 107 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Mir6352-201ENSMUST00000184495 116 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Mir6901-201ENSMUST00000185062 62 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm37054-201ENSMUST00000193481 543 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm42672-201ENSMUST00000197821 352 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm25801-201ENSMUST00000082638 106 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Gm23453-201ENSMUST00000083326 106 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Snora33-201ENSMUST00000093556 129 ntBASIC1.73□□□□□ -2.13
Cldn1O88551 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm25832-201ENSMUST00000104140 130 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm22149-201ENSMUST00000104442 136 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm27396-201ENSMUST00000157708 58 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm22654-201ENSMUST00000157874 105 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm27510-201ENSMUST00000158214 64 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Snord11-201ENSMUST00000158468 84 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm22093-201ENSMUST00000158980 111 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm22308-201ENSMUST00000177609 107 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm7654-201ENSMUST00000186738 683 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Trbv18-201ENSMUST00000194256 294 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm43723-201ENSMUST00000196886 189 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm43676-201ENSMUST00000197532 540 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm43739-201ENSMUST00000198294 307 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm45315-201ENSMUST00000209283 333 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm45403-201ENSMUST00000209453 276 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.72□□□□□ -2.13
Cldn1O88551 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm22997-201ENSMUST00000082845 107 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm25402-201ENSMUST00000082966 131 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Gm26066-201ENSMUST00000083385 109 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.72□□□□□ -2.13
Cldn1O88551 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cldn1O88551 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Cldn1O88551 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm24338-201ENSMUST00000104205 127 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Mdga2-203ENSMUST00000113942 423 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm13432-201ENSMUST00000118861 241 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Cldn1O88551 Gm26024-201ENSMUST00000158657 322 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm23660-201ENSMUST00000178362 79 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm23267-201ENSMUST00000178490 132 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm24088-201ENSMUST00000179100 79 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Cldn1O88551 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.71□□□□□ -2.14
Cldn1O88551 Gm18291-201ENSMUST00000190791 301 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm36953-201ENSMUST00000195295 268 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm3724-201ENSMUST00000197957 349 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm43472-201ENSMUST00000200175 154 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm44149-201ENSMUST00000204256 226 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.71□□□□□ -2.14
Cldn1O88551 Gm24623-201ENSMUST00000082616 194 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Gm24043-201ENSMUST00000083108 116 ntBASIC1.71□□□□□ -2.14
Cldn1O88551 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cldn1O88551 Gm12646-201ENSMUST00000119144 238 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms