Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm26255-201ENSMUST00000122492 103 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm5958-201ENSMUST00000147698 297 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm24409-201ENSMUST00000157881 152 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col5a1O88207 Gm17148-201ENSMUST00000164702 249 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm20462-201ENSMUST00000172623 408 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm20698-201ENSMUST00000175657 233 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm23725-201ENSMUST00000177876 107 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Mir6335-201ENSMUST00000184081 98 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Mir8106-201ENSMUST00000184520 139 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.37□□□□□ -2.19
Col5a1O88207 Gm7858-201ENSMUST00000190177 622 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm37313-201ENSMUST00000191673 290 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm38050-201ENSMUST00000191904 238 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col5a1O88207 Gm9402-201ENSMUST00000196849 388 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 mt-Td-201ENSMUST00000082404 70 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm23345-201ENSMUST00000083817 150 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm23850-201ENSMUST00000083830 169 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col5a1O88207 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm14069-201ENSMUST00000120815 229 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm22038-201ENSMUST00000157277 242 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm23752-201ENSMUST00000157584 115 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm25982-201ENSMUST00000157920 101 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm15914-201ENSMUST00000161922 309 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm24086-201ENSMUST00000175171 98 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm28008-201ENSMUST00000184021 186 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm21673-201ENSMUST00000186640 436 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm21135-201ENSMUST00000189023 436 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm37128-201ENSMUST00000192599 232 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm42834-201ENSMUST00000196845 256 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm43402-201ENSMUST00000197159 159 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm43739-201ENSMUST00000198294 307 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm45704-201ENSMUST00000212582 403 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm23404-201ENSMUST00000082543 97 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm23650-201ENSMUST00000083355 70 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col5a1O88207 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm23708-201ENSMUST00000104367 123 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm14894-201ENSMUST00000117170 270 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm15223-201ENSMUST00000120989 826 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm23783-201ENSMUST00000157941 102 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm27582-201ENSMUST00000184084 126 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.36□□□□□ -2.19
Col5a1O88207 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm37449-201ENSMUST00000193016 270 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm18658-201ENSMUST00000195558 270 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Mir219b-201ENSMUST00000198317 65 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm29848-201ENSMUST00000203107 295 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm45375-201ENSMUST00000210338 280 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col5a1O88207 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.36□□□□□ -2.19
Col5a1O88207 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.36□□□□□ -2.19
Col5a1O88207 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col5a1O88207 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23422-201ENSMUST00000102000 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm13343-201ENSMUST00000116474 105 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm11248-201ENSMUST00000119568 201 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24596-201ENSMUST00000122504 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26278-201ENSMUST00000157098 132 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22216-201ENSMUST00000157557 114 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23137-201ENSMUST00000157559 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22843-201ENSMUST00000157710 134 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23557-201ENSMUST00000157820 138 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm24584-201ENSMUST00000157972 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm22242-201ENSMUST00000175224 118 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25211-201ENSMUST00000177553 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23151-201ENSMUST00000178061 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25245-201ENSMUST00000178139 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26245-201ENSMUST00000178491 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25671-201ENSMUST00000178612 105 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23610-201ENSMUST00000178659 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25312-201ENSMUST00000178972 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25101-201ENSMUST00000179057 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm26378-201ENSMUST00000179093 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23191-201ENSMUST00000179147 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23307-201ENSMUST00000179167 105 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm23712-201ENSMUST00000179713 107 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25286-201ENSMUST00000179790 105 ntBASIC1.35□□□□□ -2.19
Col5a1O88207 Gm25173-201ENSMUST00000179794 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms