Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm24348-201ENSMUST00000158710 130 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm44468-201ENSMUST00000199516 105 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm44083-201ENSMUST00000203114 337 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm26494-201ENSMUST00000083154 143 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm24493-201ENSMUST00000083805 143 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm26111-201ENSMUST00000083969 106 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm26329-201ENSMUST00000093723 110 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm25407-201ENSMUST00000104102 134 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Mir872-201ENSMUST00000104728 81 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm9059-201ENSMUST00000118319 183 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm23867-201ENSMUST00000122649 274 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm25012-201ENSMUST00000158396 164 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Mir6399-201ENSMUST00000184050 84 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm27640-201ENSMUST00000184580 147 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm28257-201ENSMUST00000185244 463 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Mir7215-201ENSMUST00000200383 51 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm43978-201ENSMUST00000203491 451 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Gm24152-201ENSMUST00000082764 163 ntBASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav13d-3J3QMG8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm11598-201ENSMUST00000119257 357 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm12785-201ENSMUST00000122052 172 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm25888-201ENSMUST00000157778 302 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm26406-201ENSMUST00000158503 124 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm22858-201ENSMUST00000174972 76 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm24308-201ENSMUST00000177773 114 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm21827-201ENSMUST00000178247 423 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm25933-201ENSMUST00000178943 108 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm44858-201ENSMUST00000207360 154 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm23345-201ENSMUST00000083817 150 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm25512-201ENSMUST00000083863 107 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm25628-201ENSMUST00000084002 105 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.09□□□□□ -2.07
Trav13d-3J3QMG8 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.09□□□□□ -2.08
Trav13d-3J3QMG8 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trav13d-3J3QMG8 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trav13d-3J3QMG8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Trav13d-3J3QMG8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm23803-201ENSMUST00000104610 132 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm14298-201ENSMUST00000139032 237 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm16356-201ENSMUST00000143300 169 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm24480-201ENSMUST00000157442 103 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm25866-201ENSMUST00000158245 112 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm24618-201ENSMUST00000177718 94 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm23953-201ENSMUST00000178214 94 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm26332-201ENSMUST00000179813 94 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm22863-201ENSMUST00000180265 94 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Mir6405-201ENSMUST00000184584 124 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm20257-202ENSMUST00000188643 130 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm28744-201ENSMUST00000189939 340 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm42578-201ENSMUST00000199960 194 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm25589-201ENSMUST00000082502 166 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm22978-201ENSMUST00000082607 160 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Gm22685-201ENSMUST00000082848 106 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.08□□□□□ -2.08
Trav13d-3J3QMG8 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Gm25945-201ENSMUST00000122484 135 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Gm24053-201ENSMUST00000158620 105 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Gm17065-201ENSMUST00000165245 239 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Gm45207-201ENSMUST00000207469 145 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav13d-3J3QMG8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm13581-201ENSMUST00000120675 278 ntBASIC2.06□□□□□ -2.08
Trav13d-3J3QMG8 Gm25059-201ENSMUST00000157367 117 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms