Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm23904-201ENSMUST00000157567 124 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm24077-201ENSMUST00000158183 136 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm26290-201ENSMUST00000158891 145 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
Col6a5A6H584 Gm26712-201ENSMUST00000180813 217 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Mir8107-201ENSMUST00000184024 117 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm9156-201ENSMUST00000189660 463 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm29014-201ENSMUST00000191422 326 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0□□□□□ -2.41
Col6a5A6H584 Gm17906-201ENSMUST00000202480 901 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0□□□□□ -2.41
Col6a5A6H584 AC158597.1-201ENSMUST00000216234 150 ntBASIC0□□□□□ -2.41
Col6a5A6H584 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0□□□□□ -2.41
Col6a5A6H584 CT025602.1-201ENSMUST00000227281 382 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm26326-201ENSMUST00000083070 129 ntBASIC0□□□□□ -2.41
Col6a5A6H584 Gm24116-201ENSMUST00000103975 107 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 n-R5s218-201ENSMUST00000122583 109 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm24716-201ENSMUST00000157524 104 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm25333-201ENSMUST00000158035 246 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm24002-201ENSMUST00000158456 104 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm23053-201ENSMUST00000175136 96 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC-0□□□□□ -2.41
Col6a5A6H584 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC-0□□□□□ -2.41
Col6a5A6H584 Gm27869-201ENSMUST00000184327 122 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm28356-202ENSMUST00000187566 858 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm36997-201ENSMUST00000195090 707 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AL669916.3-201ENSMUST00000213855 94 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AL669916.6-201ENSMUST00000214610 94 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AL669916.4-201ENSMUST00000215976 94 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AL669916.1-201ENSMUST00000217640 94 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm46194-201ENSMUST00000218136 320 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AC134254.4-201ENSMUST00000223086 370 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AC113441.1-201ENSMUST00000223464 134 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 AC165284.1-201ENSMUST00000228614 458 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC-0□□□□□ -2.41
Col6a5A6H584 Gm25589-201ENSMUST00000082502 166 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Gm25650-201ENSMUST00000083784 162 ntBASIC-0□□□□□ -2.41
Col6a5A6H584 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC-0□□□□□ -2.41
Col6a5A6H584 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm11843-201ENSMUST00000118984 425 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm23588-201ENSMUST00000157659 99 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21978-201ENSMUST00000179696 377 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm27342-201ENSMUST00000183530 109 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm29299-201ENSMUST00000185609 923 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm34783-201ENSMUST00000209159 303 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm18645-201ENSMUST00000209593 651 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 AC164086.1-201ENSMUST00000221038 289 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 AC124196.2-201ENSMUST00000224835 145 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Snora62-201ENSMUST00000082991 149 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm23462-201ENSMUST00000083264 104 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm24611-201ENSMUST00000083272 107 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Mir350-201ENSMUST00000083639 99 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm10360-201ENSMUST00000097219 272 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Zfp640-202ENSMUST00000224116 1562 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Mir467h-201ENSMUST00000116759 121 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm26303-201ENSMUST00000116845 119 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm14903-201ENSMUST00000122435 537 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm28921-201ENSMUST00000190219 378 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm44024-201ENSMUST00000203008 476 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.01□□□□□ -2.41
Col6a5A6H584 Gm45439-201ENSMUST00000211723 359 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms